Ss1.1-Pig4-TMW8058E19.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTGGAGGACCATGGGGAAGCGTTGTTGTCCTTCAGGAGGAAGGGGCGGGGCCTCAT CACCATCAGGGAGCCACTGAAACAAGGCTGTTCCTAAGGACTTCATTCCCAGTCCACTCC AGACCCAGGAGTCGGTGAGGTGGTACCAGCTTCACAGCTGATTGCGGTTCCGCTTGGGAA TGATCTTTCGGTAGGTTCTGCGCTCTGAGATGTTGCGTTTGACCTTGGCTGTGGTGGGGG CCTCGTCCTGGTGCAGGGACGGGCTGGAGTGGGACTTCTTCAGGCTGGGCTTGGGCTCCT GAGTGCCGGCGGCCTCCCTCCCCAGCTGCTCCTCCCACAGGTCAAGGCTGTCCGCAGGGC AGCGCAGACGGGCCACCAGCAGTTCCACGTAAGTCTCGTAGCGGGTTTTCTCGTACTCCA GATACTCCTTCCGCAAGCGGTAGTCCTCCAGCTCGCGGCTGCGGCCCCGGCGCTCCGGTA AGTTCCTCTGCAGATCCAGCAGATCGTCGGAGGCAGCGTCCAGGCAGTTCTCGTGGGATC GATGCTGTTCCTCCAGGGAGCTCTGCGCCGGGCCCATCGGCAGGATGGGCCGGACGAATC TACGTTGGGAGCCCACCGCGGCCGGGAAGGGTGGCGCTGAGTGCGTGGCAGCCGCCAGGT TGATGCGCGCGATCCAGGAAGTCATCTCTTGGGCAGTGGGTGCCTGGAAGAGGTAGAGGC GCCAGTCGGCTGTGCGCAGCTGGAAGACATGCGGCTTCTTGGTGTAATGGGTGGCGGGGG TGGCCAGCGAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTGGAGGACCATGGGGAAGCGTTGTTGTCCTTCAGGAGGAAGGGGCGGGGCCTCAT CACCATCAGGGAGCCACTGAAACAAGGCTGTTCCTAAGGACTTCATTCCCAGTCCACTCC AGACCCAGGAGTCGGTGAGGTGGTACCAGCTTCACAGCTGATTGCGGTTCCGCTTGGGAA TGATCTTTCGGTAGGTTCTGCGCTCTGAGATGTTGCGTTTGACCTTGGCTGTGGTGGGGG CCTCGTCCTGGTGCAGGGACGGGCTGGAGTGGGACTTCTTCAGGCTGGGCTTGGGCTCCT GAGTGCCGGCGGCCTCCCTCCCCAGCTGCTCCTCCCACAGGTCAAGGCTGTCCGCAGGGC AGCGCAGACGGGCCACCAGCAGTTCCACGTAAGTCTCGTAGCGGGTTTTCTCGTACTCCA GATACTCCTTCCGCAAGCGGTAGTCCTCCAGCTCGCGGCTGCGGCCCCGGCGCTCCGGTA AGTTCCTCTGCAGATCCAGCAGATCGTCGGAGGCAGCGTCCAGGCAGTTCTCGTGGGATC GATGCTGTTCCTCCAGGGAGCTCTGCGCCGGGCCCATCGGCAGGATGGGCCGGACGAATC TACGTTGGGAGCCCACCGCGGCCGGGAAGGGTGGCGCTGAGTGCGTGGCAGCCGCCAGGT TGATGCGCGCGATCCAGGAAGTCATCTCTTGGGCAGTGGGTGCCTGGAAGAGGTAGAGGC GCCAGTCGGCTGTGCGCAGCTGGAAGACATGCGGCTTCTTGGTGTAATGGGTGGCGGGGG TGGCCAGCGAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 92-476, gnl|bosTau2|chr11 (33514924-33515319) | |
| 92-476, gnl|Hg17|chr2 (113675349-113674959) | |
| 92-476, gnl|Mm7|chr2 (24414656-24414281) | |
| 613-758, gnl|bosTau2|chr11 (33517716-33517861) | |
| 613-758, gnl|canFam2|chr17 (40401495-40401631) | |
| 613-758, gnl|danRer3|chr16 (16598893-16599027) | |
| 613-758, gnl|echTel1|scaffold_154948 (2063-2199) | |
| 613-758, gnl|fr1|chrUn (146722653-146722542) | |
| 613-758, gnl|hg17|chr2 (113672534-113672669) | |
| 613-758, gnl|Hg17|chr2 (113672693-113672548) | |
| 613-758, gnl|loxAfr1|scaffold_13013 (55450-55329) | |
| 613-758, gnl|mm7|chr2 (24412603-24412739) | |
| 613-758, gnl|Mm7|chr2 (24412763-24412618) | |
| 613-758, gnl|monDom2|scaffold_63 (5830881-5830751) | |
| 613-758, gnl|oryCun1|scaffold_210750 (5853-5725) | |
| 613-758, gnl|panTro1|chr12 (116741864-116741999) | |
| 613-758, gnl|rheMac2|chr13 (112568586-112568721) | |
| 613-758, gnl|rn3|chr3 (2656048-2656184) | |
| 613-758, gnl|tetNig1|chr4 (2566096-2565985) | |
| 613-758, gnl|xenTro1|scaffold_217 (727394-727265) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 92-476, gnl|bosTau2|chr11 (33514924-33515319) | |
| 92-476, gnl|Hg17|chr2 (113675349-113674959) | |
| 92-476, gnl|Mm7|chr2 (24414656-24414281) | |
| 613-758, gnl|bosTau2|chr11 (33517716-33517861) | |
| 613-758, gnl|canFam2|chr17 (40401495-40401631) | |
| 613-758, gnl|danRer3|chr16 (16598893-16599027) | |
| 613-758, gnl|echTel1|scaffold_154948 (2063-2199) | |
| 613-758, gnl|fr1|chrUn (146722653-146722542) | |
| 613-758, gnl|hg17|chr2 (113672534-113672669) | |
| 613-758, gnl|Hg17|chr2 (113672693-113672548) | |
| 613-758, gnl|loxAfr1|scaffold_13013 (55450-55329) | |
| 613-758, gnl|mm7|chr2 (24412603-24412739) | |
| 613-758, gnl|Mm7|chr2 (24412763-24412618) | |
| 613-758, gnl|monDom2|scaffold_63 (5830881-5830751) | |
| 613-758, gnl|oryCun1|scaffold_210750 (5853-5725) | |
| 613-758, gnl|panTro1|chr12 (116741864-116741999) | |
| 613-758, gnl|rheMac2|chr13 (112568586-112568721) | |
| 613-758, gnl|rn3|chr3 (2656048-2656184) | |
| 613-758, gnl|tetNig1|chr4 (2566096-2565985) | |
| 613-758, gnl|xenTro1|scaffold_217 (727394-727265) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| ill (0.175593) | |
| eli (0.151814) | |
| lnt (0.142308) | |
| cly (0.120642) | |
| jej (0.0989218) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| eli (0.151814) | |
| lnt (0.142308) | |
| cly (0.120642) | |
| jej (0.0989218) |