Non-Coding RNA Search

Ss1.1-Pig4-TMW8058F04.5

Sequence:


               
               ATGTTTCACAGG------------------------------------------------
------------------------------------------------TAAAAAAGAAAA
AAAAAAAAAAAAGCCAAAAAACAAAACAAACAAAAAACCTGTTTCCACTTTGAAATTCCT
TTAGGTTGCAAACCTCAGGGCATCTGGCTGGAGCTCAGATGCCCGAAAAAAATAGCTGTT
GTTTTATCTTCCAGCAAAGCCGTTTGAGAAGAGAGATGTCCACAGTTCTGGGGGCCATCT
CGAGACAGCCTTGCCCTAAGCCCTGAGCCAGAAGCTGTCACTGGAAATTCCTCTTTCAGC
CTTTCCTTAGAGGTGAATGTTAATGAAGAATCTCCAGGCAACACCTGAGCTTCTGAGGCC
TAGCTTACAGCCCAGATGTGGCTTAGGCACTTGGAAAATCTGGTCCATGAAATAGAGAAC
TTAGTTTGAAACATTTGTGCAGAAATCAGTGCCAACTGTACTATGTTAAACTTGGTGATC
ATTTTTCCACAGTCCTGGGCTCCATTGTTCTAAACCTTGATGGGCCCTATATTAGAATAA
TGCTCCTTGGAGTTCCCGCTGTGGTGCAGCAGGTTAAGGATCCAGTGTTGTCTCTGCCGT
GGCTCGGGTTGCTGCTGAGGCTTGGATTTGATCCCTGGCCCAGGAACTTCCATACGCCGT
GGGTGCGGCCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTTTCACAGG------------------------------------------------
------------------------------------------------TAAAAAAGAAAA
AAAAAAAAAAAAGCCAAAAAACAAAACAAACAAAAAACCTGTTTCCACTTTGAAATTCCT
TTAGGTTGCAAACCTCAGGGCATCTGGCTGGAGCTCAGATGCCCGAAAAAAATAGCTGTT
GTTTTATCTTCCAGCAAAGCCGTTTGAGAAGAGAGATGTCCACAGTTCTGGGGGCCATCT
CGAGACAGCCTTGCCCTAAGCCCTGAGCCAGAAGCTGTCACTGGAAATTCCTCTTTCAGC
CTTTCCTTAGAGGTGAATGTTAATGAAGAATCTCCAGGCAACACCTGAGCTTCTGAGGCC
TAGCTTACAGCCCAGATGTGGCTTAGGCACTTGGAAAATCTGGTCCATGAAATAGAGAAC
TTAGTTTGAAACATTTGTGCAGAAATCAGTGCCAACTGTACTATGTTAAACTTGGTGATC
ATTTTTCCACAGTCCTGGGCTCCATTGTTCTAAACCTTGATGGGCCCTATATTAGAATAA
TGCTCCTTGGAGTTCCCGCTGTGGTGCAGCAGGTTAAGGATCCAGTGTTGTCTCTGCCGT
GGCTCGGGTTGCTGCTGAGGCTTGGATTTGATCCCTGGCCCAGGAACTTCCATACGCCGT
GGGTGCGGCCGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               66-513, gnl|bosTau2|chr13 (32830187-32830645)
               

               
               66-513, gnl|Hg17|chr20 (6004417-6003935)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               66-513, gnl|bosTau2|chr13 (32830187-32830645)
               

               
               66-513, gnl|Hg17|chr20 (6004417-6003935)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	66-513, gnl\|bosTau2\|chr13 (32830187-32830645)
	66-513, gnl\|Hg17\|chr20 (6004417-6003935)