Non-Coding RNA Search

Ss1.1-Pig4-TMW8058L06.3

Sequence:


               
               CGGTGCCCGTGGAGGAGCCCTTGGAACTGTGACCCGCCGGGCCCATGGTCTCCCCTGATA
ATGGTGCTGACGGGATCCAGGACGGCCCGGGAGCCTCTCCCAGACACGTCGGCCGCCGTC
TGCAGATTCCACACACACTACATCCGCCCCCGTGGCTGCGCAACCGCTCCACGGCCTGGA
GGGCCACTCCTGTCCAGGAGCAGCGTCCGGCCCTCTCCCTGCTCTGTCCCGTGACCGACA
GGGGGACATAGGGGGTCCTGACTCAGGGGCTCTGCCCCCTCGACCTGGTACTATCTGTGA
GCAGCTGAAAGCGGCTGGCTTTCCAACCCCCTCGAGCCCTCTCCCTATCACTCCCTAAAA
CACTATTAATAGCTCCACTGCCACCCAGTGTTCCCAGAACTGCTTGGAATCCGAGGGTGG
AGGCCGGGCAGAGACTGACAGACCCTTGCAGGCGGGCCCTTCCTGCCGACCAGGGATGCA
GGTGTGGGGGGGCGTCTGCTGGCTCCTCTCAGACTGGCGCCCTCACTGTCACGTCCAGCC
CCAGACCAAAGATTCCCCCCGCCCCGGGGCAGCCCTGATCCCATGTCTAGTTTATATCCT
AAATCTTTATTTTTCTAGGACATGTTATGCCTCCATTTCAATTAAAATAAAGTTAACGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGTGCCCGTGGAGGAGCCCTTGGAACTGTGACCCGCCGGGCCCATGGTCTCCCCTGATA
ATGGTGCTGACGGGATCCAGGACGGCCCGGGAGCCTCTCCCAGACACGTCGGCCGCCGTC
TGCAGATTCCACACACACTACATCCGCCCCCGTGGCTGCGCAACCGCTCCACGGCCTGGA
GGGCCACTCCTGTCCAGGAGCAGCGTCCGGCCCTCTCCCTGCTCTGTCCCGTGACCGACA
GGGGGACATAGGGGGTCCTGACTCAGGGGCTCTGCCCCCTCGACCTGGTACTATCTGTGA
GCAGCTGAAAGCGGCTGGCTTTCCAACCCCCTCGAGCCCTCTCCCTATCACTCCCTAAAA
CACTATTAATAGCTCCACTGCCACCCAGTGTTCCCAGAACTGCTTGGAATCCGAGGGTGG
AGGCCGGGCAGAGACTGACAGACCCTTGCAGGCGGGCCCTTCCTGCCGACCAGGGATGCA
GGTGTGGGGGGGCGTCTGCTGGCTCCTCTCAGACTGGCGCCCTCACTGTCACGTCCAGCC
CCAGACCAAAGATTCCCCCCGCCCCGGGGCAGCCCTGATCCCATGTCTAGTTTATATCCT
AAATCTTTATTTTTCTAGGACATGTTATGCCTCCATTTCAATTAAAATAAAGTTAACGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-651, gnl|bosTau2|chr18 (38198334-38198995)
               

               
               3-651, gnl|Hg17|chr19 (50960628-50959903)
               

               
               3-651, gnl|Mm7|chr7 (16780090-16780713)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-651, gnl|bosTau2|chr18 (38198334-38198995)
               

               
               3-651, gnl|Hg17|chr19 (50960628-50959903)
               

               
               3-651, gnl|Mm7|chr7 (16780090-16780713)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cga (0.279096)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               eru (0.120048)

	3-651, gnl\|bosTau2\|chr18 (38198334-38198995)
	3-651, gnl\|Hg17\|chr19 (50960628-50959903)
	3-651, gnl\|Mm7\|chr7 (16780090-16780713)