Non-Coding RNA Search

Ss1.1-Pig4-TMW8058L17.5

Sequence:


               
               AAATCATGAAATATTTTTAAATGGCTGATACAAGTTTACTTTGAACAAAAATTAGTGAGA
TTTCTACCTCAAACCAATCACATACAATTCTAAATAGTTTTAACAGCTAAACAAAAGGCA
AAATACAGAGTAAGACAAGGTGTTCAGGTGTACGAGCATAAAGCAAAAGACAAGCTGCCT
ATGTCACAAAGTAAAAGAAGCAACAAAAGAAAGTAGGTCTATGATAAATATAAAAAGAGG
AGTATATAAAAAGAACCATAAGAAAACAAGACAAGAAAGTTGGGCAGAGGTTATAATTAT
GCAATACAGAAGAAACAGGATTATTTGACATGGAAATATCAGTATCAGAATAATAAGAGA
AATGCAAATTAAAATACCGATGTGATGATTATTTCTTCACCCAGACTGGCAGAAGTTAAA
TACTGATACTATTAAATGTTGTACAATGTGTATGAAAACAATGAAAAGGGAAAAAACCCT
TTTCTAAATACATAATAGTGAAAAGCTTGGCAAAGATAACAACTATAAGTTACCTCTCGG
GATGAAACTGGGATTTGGGTTTTGGTTAAAGAGAACTCTGGTTTACCTGTATTAAATTGG
CTTTAATAATGACACTATATTACTTGTGTATTAAAAAAGATAAAAGAATTTTAAAGACCA
AGAAAAAATATTTTATCCTAAAGTAGTGCTTGTAAGTGTGATTTATGGACCATTTCCAGC
GTGCAATGAGATAAGTATAGAAATTGAGTGTGTGTTTAGAAATTTTTATAGGAATTTGAT
AGATTTATTTATGACTACTGAATCTAATAAAATTAAGCTTATTGAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATCATGAAATATTTTTAAATGGCTGATACAAGTTTACTTTGAACAAAAATTAGTGAGA
TTTCTACCTCAAACCAATCACATACAATTCTAAATAGTTTTAACAGCTAAACAAAAGGCA
AAATACAGAGTAAGACAAGGTGTTCAGGTGTACGAGCATAAAGCAAAAGACAAGCTGCCT
ATGTCACAAAGTAAAAGAAGCAACAAAAGAAAGTAGGTCTATGATAAATATAAAAAGAGG
AGTATATAAAAAGAACCATAAGAAAACAAGACAAGAAAGTTGGGCAGAGGTTATAATTAT
GCAATACAGAAGAAACAGGATTATTTGACATGGAAATATCAGTATCAGAATAATAAGAGA
AATGCAAATTAAAATACCGATGTGATGATTATTTCTTCACCCAGACTGGCAGAAGTTAAA
TACTGATACTATTAAATGTTGTACAATGTGTATGAAAACAATGAAAAGGGAAAAAACCCT
TTTCTAAATACATAATAGTGAAAAGCTTGGCAAAGATAACAACTATAAGTTACCTCTCGG
GATGAAACTGGGATTTGGGTTTTGGTTAAAGAGAACTCTGGTTTACCTGTATTAAATTGG
CTTTAATAATGACACTATATTACTTGTGTATTAAAAAAGATAAAAGAATTTTAAAGACCA
AGAAAAAATATTTTATCCTAAAGTAGTGCTTGTAAGTGTGATTTATGGACCATTTCCAGC
GTGCAATGAGATAAGTATAGAAATTGAGTGTGTGTTTAGAAATTTTTATAGGAATTTGAT
AGATTTATTTATGACTACTGAATCTAATAAAATTAAGCTTATTGAATC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-822, gnl|bosTau2|chr7 (54212134-54211314)
               

               
               2-822, gnl|Mm7|chr13 (82278624-82277858)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-822, gnl|bosTau2|chr7 (54212134-54211314)
               

               
               2-822, gnl|Mm7|chr13 (82278624-82277858)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               liv (0.438853)
               

               
               mgp (0.230681)
               

               
               fco (0.157208)
               

               
               lun (0.150489)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.438853)
               

               
               mgp (0.230681)
               

               
               fco (0.157208)
               

               
               lun (0.150489)

	2-822, gnl\|bosTau2\|chr7 (54212134-54211314)
	2-822, gnl\|Mm7\|chr13 (82278624-82277858)