Ss1.1-Pig4-TMW8058O06.3
|
GCAGACACTCAACTAAGTGAGCTGGAAGACCCAGGGGAAGGCCAAGGCTCAGGTGCCCAC
ATGATCAGCACAGCCAGGGTACCTGCAGATAAGCCAGTACGCATTGCCTTCAGCCTCGAT
AATGCCCCAGATGATACACCTCCTGAAGACTCTGATCCTCTGGCCTTTCCAGAATTAGAA
CAGCAGCTGCAGCCTCTGCCGCCTTGTCACGACTCCATGGAATCCATGCAGGTGTTCAAG
CAGAAAAGGAGAAGCTGGATGCTGCTCAGCTGGTTCGGGAATTCGAGGCACTGACAGAGG
AGAATCGGACGTTGAAGCTGGCCCAGTCCCAGTGTGTAGAACAACTGGAGAAACTTAGAA
TACAGTATCAGAAAAGACAGGGCTCGTCCTAACTTGAAACTTTTCAATGTGAGCGTAAGA
GGTTGGTGCCAGCTATGCGCTGGCCAAAAGATTTTTATTTTAAAGGGATAATGAGTAAAA
CCTATGCTTCTCCTTATTACCCACATGCCAAATGTCTGTACTAATGAGTTTAATGCTTGC
CAGATCCAGTTAGAGAGAAGGGATATTTTATTTTAAACAAGGTGATTAAAGCAAACCTAT
TACCAGACGTTTTCAGAGCTCATAATTCATTTCCAAAGATATATATTTTTTTCTTGTTTA
GCAAGATATGGCCATACTGTCTATCAGGGTAAAAATGCTAGAAATAGAATATTGCCTGAC
TCCGCTAAGGATCATGAACACAATTAAGCCATGGAACAAAGTAGTAAGATGCTCACTGCA
GTTTCACATCTGCATATTTTTAATTTTCACATCTTTATTATTTCGACTTGCTCCATTCTG
AACTGTCAAAAACTTCTCTGCCTATGTTTATGTTCACCAGAGTTAGATTTAATCCCTTAC
TGATTGAGCTAAGAATAAATGGTTGCATATCATAAAAGCTTTCTCATGAAAATATTAGTG
GAAAGCATGTTTGTGCCAGAAGCACATTTGCTAGTGCTAACTTGCTGTTGTAATAAAAAG
CTGATAAGGCAGCATTTTCTTCATGCCACGTTACCTCCTGGTAAACATCCCTGCTTTTGC
TTGTGTGTGTTCTGGGGGAAACAGAAAAGCATTGTTTGGACATTCTTCGGTGAGTTCCCA
TGTAACCATCAGCAAAATTCTATTATTCTGTTTTGGATTTAAAGTGATGTTTTGAATCAG
TGATAACTAATAAGAATATATGAGTAAATTCAGGATTAAAATGATTTGTTCCTTGTTCTA
TCCATCACCATATTTTCCCAAATTGATCTCTATGTTTTATGTCCATTTCTATTCCTGTAA
CTTCTTTTTCATTAAACACAGATC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCAGACACTCAACTAAGTGAGCTGGAAGACCCAGGGGAAGGCCAAGGCTCAGGTGCCCAC
ATGATCAGCACAGCCAGGGTACCTGCAGATAAGCCAGTACGCATTGCCTTCAGCCTCGAT
AATGCCCCAGATGATACACCTCCTGAAGACTCTGATCCTCTGGCCTTTCCAGAATTAGAA
CAGCAGCTGCAGCCTCTGCCGCCTTGTCACGACTCCATGGAATCCATGCAGGTGTTCAAG
CAGAAAAGGAGAAGCTGGATGCTGCTCAGCTGGTTCGGGAATTCGAGGCACTGACAGAGG
AGAATCGGACGTTGAAGCTGGCCCAGTCCCAGTGTGTAGAACAACTGGAGAAACTTAGAA
TACAGTATCAGAAAAGACAGGGCTCGTCCTAACTTGAAACTTTTCAATGTGAGCGTAAGA
GGTTGGTGCCAGCTATGCGCTGGCCAAAAGATTTTTATTTTAAAGGGATAATGAGTAAAA
CCTATGCTTCTCCTTATTACCCACATGCCAAATGTCTGTACTAATGAGTTTAATGCTTGC
CAGATCCAGTTAGAGAGAAGGGATATTTTATTTTAAACAAGGTGATTAAAGCAAACCTAT
TACCAGACGTTTTCAGAGCTCATAATTCATTTCCAAAGATATATATTTTTTTCTTGTTTA
GCAAGATATGGCCATACTGTCTATCAGGGTAAAAATGCTAGAAATAGAATATTGCCTGAC
TCCGCTAAGGATCATGAACACAATTAAGCCATGGAACAAAGTAGTAAGATGCTCACTGCA
GTTTCACATCTGCATATTTTTAATTTTCACATCTTTATTATTTCGACTTGCTCCATTCTG
AACTGTCAAAAACTTCTCTGCCTATGTTTATGTTCACCAGAGTTAGATTTAATCCCTTAC
TGATTGAGCTAAGAATAAATGGTTGCATATCATAAAAGCTTTCTCATGAAAATATTAGTG
GAAAGCATGTTTGTGCCAGAAGCACATTTGCTAGTGCTAACTTGCTGTTGTAATAAAAAG
CTGATAAGGCAGCATTTTCTTCATGCCACGTTACCTCCTGGTAAACATCCCTGCTTTTGC
TTGTGTGTGTTCTGGGGGAAACAGAAAAGCATTGTTTGGACATTCTTCGGTGAGTTCCCA
TGTAACCATCAGCAAAATTCTATTATTCTGTTTTGGATTTAAAGTGATGTTTTGAATCAG
TGATAACTAATAAGAATATATGAGTAAATTCAGGATTAAAATGATTTGTTCCTTGTTCTA
TCCATCACCATATTTTCCCAAATTGATCTCTATGTTTTATGTCCATTTCTATTCCTGTAA
CTTCTTTTTCATTAAACACAGATC
|
|
20-130, gnl|bosTau2|chr1 (6422160-6422050) |
|
20-130, gnl|canFam2|chr31 (27152274-27152437) |
|
20-130, gnl|echTel1|scaffold_304469 (4928-5092) |
|
20-130, gnl|galGal2|chr1 (97790988-97791148) |
|
20-130, gnl|hg17|chr21 (29427458-29427622) |
|
20-130, gnl|Hg17|chr21 (29427496-29427606) |
|
20-130, gnl|loxAfr1|scaffold_4492 (31156-31314) |
|
20-130, gnl|mm7|chr16 (87597810-87597975) |
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20-130, gnl|Mm7|chr16 (87597848-87597958) |
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20-130, gnl|oryCun1|scaffold_210028 (4590-4754) |
|
20-130, gnl|panTro1|chr22 (29450014-29450178) |
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20-130, gnl|rheMac2|chr3 (17524025-17523861) |
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20-130, gnl|rn3|chr11 (27318933-27319098) |
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20-130, gnl|xenTro1|scaffold_490 (515278-515429) |
| |
|
236-1344, gnl|bosTau2|chr1 (6378442-6377354) |
|
236-1344, gnl|Hg17|chr21 (29468928-29470071) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
20-130, gnl|bosTau2|chr1 (6422160-6422050) |
|
20-130, gnl|canFam2|chr31 (27152274-27152437) |
|
20-130, gnl|echTel1|scaffold_304469 (4928-5092) |
|
20-130, gnl|galGal2|chr1 (97790988-97791148) |
|
20-130, gnl|hg17|chr21 (29427458-29427622) |
|
20-130, gnl|Hg17|chr21 (29427496-29427606) |
|
20-130, gnl|loxAfr1|scaffold_4492 (31156-31314) |
|
20-130, gnl|mm7|chr16 (87597810-87597975) |
|
20-130, gnl|Mm7|chr16 (87597848-87597958) |
|
20-130, gnl|oryCun1|scaffold_210028 (4590-4754) |
|
20-130, gnl|panTro1|chr22 (29450014-29450178) |
|
20-130, gnl|rheMac2|chr3 (17524025-17523861) |
|
20-130, gnl|rn3|chr11 (27318933-27319098) |
|
20-130, gnl|xenTro1|scaffold_490 (515278-515429) |
| |
|
236-1344, gnl|bosTau2|chr1 (6378442-6377354) |
|
236-1344, gnl|Hg17|chr21 (29468928-29470071) |
|
sme (0.305437) |
|
aor (0.195274) |
|
ton (0.1755) |
|
pla (0.133672) |
|
sme (0.305437) |
|
aor (0.195274) |
|
ton (0.1755) |
|
pla (0.133672) |
