Ss1.1-Pig4-TMW8058O20.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGTCATGTGGGACACCAGCTCCTATGGATATGGTGACCTGTTCTCCGACACATGGAAAG CATTTACTGATTATGATGTTATCCATTTGAAAACTTATGATTCCAAAAGGGTATGTTTTA AAGAAGCTATTTTTTCCTTACTTCCTCGGATGAGATATGGGCTGTTCTATAACACCCCTC TGATATCTGGCTGTCAAAATACCGGATTATTCAGGGCATTTTCCCAGCATGTATTACACA GACTGAATATCACACAACAGGGTCCCAAGGATGGAAAAATTCGAGTCACTATTCTTGCAC GGAGCACAGAATACCGGAAAATACTCAACCAAAATGAGCTTGTTAATGCACTGAAGACGG TATCTACCTTTGAGGTCCGGATTGTCGATTATAAATATAAAGAACTTGCGTTTTTAGATC AGCTAAGGATCACACATAACACGGACATATTTATTGGAATGCACGGAGCTGGCCTTACCC ACTTACTTTTCCTTCCAGATTGGGCTGCTGTATTTGAACTGTACAACTGTGGGGACGAAC GCTGTTACTTGGACCTGGCCAGGCTGAGAGGTGTCCACTACATCACTTGGCGAAGGCAGA ACAAAGTCTTTCCTCAAGATAAGGGTCACCACCCAACTCTGGGGGAACATCCAAAATTTA CCAACTACTCTTTTGATGTAGAAGAATTTATGTTCCTTGTCCTTCAGGCTGCAGACCATG TATTGCAACACCCAAAGTGGCCTTTTAAGAACAAACATGATGAGCTCTAAATGTGTTGAG TCTTTTTGCCAAAAGGGAGTATTTAAATGGTCCCCGACCCCACTCACCTTCCAGTTAAAT CAGTAAACCAGGCTTTTATTTCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGTCATGTGGGACACCAGCTCCTATGGATATGGTGACCTGTTCTCCGACACATGGAAAG CATTTACTGATTATGATGTTATCCATTTGAAAACTTATGATTCCAAAAGGGTATGTTTTA AAGAAGCTATTTTTTCCTTACTTCCTCGGATGAGATATGGGCTGTTCTATAACACCCCTC TGATATCTGGCTGTCAAAATACCGGATTATTCAGGGCATTTTCCCAGCATGTATTACACA GACTGAATATCACACAACAGGGTCCCAAGGATGGAAAAATTCGAGTCACTATTCTTGCAC GGAGCACAGAATACCGGAAAATACTCAACCAAAATGAGCTTGTTAATGCACTGAAGACGG TATCTACCTTTGAGGTCCGGATTGTCGATTATAAATATAAAGAACTTGCGTTTTTAGATC AGCTAAGGATCACACATAACACGGACATATTTATTGGAATGCACGGAGCTGGCCTTACCC ACTTACTTTTCCTTCCAGATTGGGCTGCTGTATTTGAACTGTACAACTGTGGGGACGAAC GCTGTTACTTGGACCTGGCCAGGCTGAGAGGTGTCCACTACATCACTTGGCGAAGGCAGA ACAAAGTCTTTCCTCAAGATAAGGGTCACCACCCAACTCTGGGGGAACATCCAAAATTTA CCAACTACTCTTTTGATGTAGAAGAATTTATGTTCCTTGTCCTTCAGGCTGCAGACCATG TATTGCAACACCCAAAGTGGCCTTTTAAGAACAAACATGATGAGCTCTAAATGTGTTGAG TCTTTTTGCCAAAAGGGAGTATTTAAATGGTCCCCGACCCCACTCACCTTCCAGTTAAAT CAGTAAACCAGGCTTTTATTTCCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 382-536, gnl|bosTau2|chr22 (23605085-23605239) | |
| 382-536, gnl|canFam2|chr20 (25749835-25749682) | |
| 382-536, gnl|danRer3|chr11 (17311763-17311920) | |
| 382-536, gnl|dasNov1|scaffold_309 (140182-140345) | |
| 382-536, gnl|echTel1|scaffold_234326 (1541-1396) | |
| 382-536, gnl|fr1|chrUn (169500187-169500315) | |
| 382-536, gnl|galGal2|chrUn (128138084-128138218) | |
| 382-536, gnl|hg17|chr3 (69111488-69111642) | |
| 382-536, gnl|Hg17|chr3 (69111647-69111493) | |
| 382-536, gnl|mm7|chr6 (97201904-97202055) | |
| 382-536, gnl|Mm7|chr6 (97202060-97201909) | |
| 382-536, gnl|monDom2|scaffold_5 (16283902-16284053) | |
| 382-536, gnl|oryCun1|scaffold_197755 (3962-4115) | |
| 382-536, gnl|panTro1|chr2 (70896880-70897034) | |
| 382-536, gnl|rheMac2|chr2 (67175033-67174879) | |
| 382-536, gnl|rn3|chr4 (132079875-132080022) | |
| 382-536, gnl|tetNig1|chr11 (1242944-1242815) | |
| 382-536, gnl|xenTro1|scaffold_740 (260505-260639) | |
| 622-864, gnl|bosTau2|chr22 (23608095-23608338) | |
| 622-864, gnl|Hg17|chr3 (69109607-69109369) | |
| 622-864, gnl|Mm7|chr6 (97200289-97200054) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 382-536, gnl|bosTau2|chr22 (23605085-23605239) | |
| 382-536, gnl|canFam2|chr20 (25749835-25749682) | |
| 382-536, gnl|danRer3|chr11 (17311763-17311920) | |
| 382-536, gnl|dasNov1|scaffold_309 (140182-140345) | |
| 382-536, gnl|echTel1|scaffold_234326 (1541-1396) | |
| 382-536, gnl|fr1|chrUn (169500187-169500315) | |
| 382-536, gnl|galGal2|chrUn (128138084-128138218) | |
| 382-536, gnl|hg17|chr3 (69111488-69111642) | |
| 382-536, gnl|Hg17|chr3 (69111647-69111493) | |
| 382-536, gnl|mm7|chr6 (97201904-97202055) | |
| 382-536, gnl|Mm7|chr6 (97202060-97201909) | |
| 382-536, gnl|monDom2|scaffold_5 (16283902-16284053) | |
| 382-536, gnl|oryCun1|scaffold_197755 (3962-4115) | |
| 382-536, gnl|panTro1|chr2 (70896880-70897034) | |
| 382-536, gnl|rheMac2|chr2 (67175033-67174879) | |
| 382-536, gnl|rn3|chr4 (132079875-132080022) | |
| 382-536, gnl|tetNig1|chr11 (1242944-1242815) | |
| 382-536, gnl|xenTro1|scaffold_740 (260505-260639) | |
| 622-864, gnl|bosTau2|chr22 (23608095-23608338) | |
| 622-864, gnl|Hg17|chr3 (69109607-69109369) | |
| 622-864, gnl|Mm7|chr6 (97200289-97200054) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) | |
| lun (0.150489) |