Ss1.1-Pig4-TMW8058O22.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAGTGAACCTATTTGTAGTGAACAAGCCCTGGCTCTTCTCCCTACTCTGGTGTGCCGGG GTGGATTCAGTCACCACCAACGACTGCCAGCTGCTGCAGCAGATGCATTACCCCATCTGG CTTATTCCCCCGCAAACCTACCTAATGGTGTGGATTGTTACCAATTGTGTCTCTATCCTA CTGCTTTTGTGGACTTTCCTCCTCCAACGGAGATGTGCTAAGGAGAGAGAACGAACTGGC TTAGAAACAGCAGTGCTGCTCACCAGGATCAACAATTTCATAATGGAGTGAATCCCCTGC CCCGGGCCCATGCCAACCAGAATCTGTGGCCTGTGCGTTGGTCAACAGGAAGGAAGGAAT GGCTGAGGTGGAATGTTGGTGGGGCTGGGCTGGGTTGAACTTTCCCAAAAGGAAGTTTTG AACTATGAGGGCCCTCTGCCCAGATGGTGGGCATGCCCCAAGCTTCCATGGAATCTGTTC CCCTTGGGGTTTTGACCTGAGGTGGTTAGGCAGACACCAAGTCATGAGAAGTTCCTCCCC AAACGAGACTAGAACAGAGGAAGGGACAAGGAGATTGCCCAGATAATGTTTCAGATCTGC GTGCATGCGTTCTTGTGCAGAAGGCACAGGGTGTCAGGGATGGGACAGCTTGGAACCATG ACTGAAGGAGATGACAAAATGACCTTTCCTGGAGAACCATCAGATGATGGAGACATCGCC ATTCACTGTCTCCCCTGACATAATGCAATTTATCTGCATTCCTGCCTAGAAGCTGGGGGC TAAAGAGCCCATCTAGCCATGTAATTCTGTGTCTACAGGTGGCCTCTTGCTGTGCACAGT CTTTTCTTCAAGACATTGATTCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAGTGAACCTATTTGTAGTGAACAAGCCCTGGCTCTTCTCCCTACTCTGGTGTGCCGGG GTGGATTCAGTCACCACCAACGACTGCCAGCTGCTGCAGCAGATGCATTACCCCATCTGG CTTATTCCCCCGCAAACCTACCTAATGGTGTGGATTGTTACCAATTGTGTCTCTATCCTA CTGCTTTTGTGGACTTTCCTCCTCCAACGGAGATGTGCTAAGGAGAGAGAACGAACTGGC TTAGAAACAGCAGTGCTGCTCACCAGGATCAACAATTTCATAATGGAGTGAATCCCCTGC CCCGGGCCCATGCCAACCAGAATCTGTGGCCTGTGCGTTGGTCAACAGGAAGGAAGGAAT GGCTGAGGTGGAATGTTGGTGGGGCTGGGCTGGGTTGAACTTTCCCAAAAGGAAGTTTTG AACTATGAGGGCCCTCTGCCCAGATGGTGGGCATGCCCCAAGCTTCCATGGAATCTGTTC CCCTTGGGGTTTTGACCTGAGGTGGTTAGGCAGACACCAAGTCATGAGAAGTTCCTCCCC AAACGAGACTAGAACAGAGGAAGGGACAAGGAGATTGCCCAGATAATGTTTCAGATCTGC GTGCATGCGTTCTTGTGCAGAAGGCACAGGGTGTCAGGGATGGGACAGCTTGGAACCATG ACTGAAGGAGATGACAAAATGACCTTTCCTGGAGAACCATCAGATGATGGAGACATCGCC ATTCACTGTCTCCCCTGACATAATGCAATTTATCTGCATTCCTGCCTAGAAGCTGGGGGC TAAAGAGCCCATCTAGCCATGTAATTCTGTGTCTACAGGTGGCCTCTTGCTGTGCACAGT CTTTTCTTCAAGACATTGATTCCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-126, gnl|bosTau2|chrX (20417805-20417930) | |
| 1-126, gnl|canFam2|chrX (57800511-57800671) | |
| 1-126, gnl|danRer3|chr14 (56769804-56769964) | |
| 1-126, gnl|dasNov1|scaffold_39733 (8116-7956) | |
| 1-126, gnl|echTel1|scaffold_210070 (3031-3191) | |
| 1-126, gnl|fr1|chrUn (268655642-268655482) | |
| 1-126, gnl|galGal2|chr4 (2348895-2348735) | |
| 1-126, gnl|hg17|chrX (69435171-69435331) | |
| 1-126, gnl|Hg17|chrX (69435200-69435325) | |
| 1-126, gnl|loxAfr1|scaffold_57910 (6072-5935) | |
| 1-126, gnl|mm7|chrX (96064813-96064973) | |
| 1-126, gnl|Mm7|chrX (96064842-96064967) | |
| 1-126, gnl|monDom2|scaffold_188 (717735-717866) | |
| 1-126, gnl|oryCun1|scaffold_196874 (46322-46482) | |
| 1-126, gnl|panTro1|chrX (71602692-71602852) | |
| 1-126, gnl|rheMac2|chrX (69405776-69405936) | |
| 1-126, gnl|rn3|chrX (88825283-88825443) | |
| 1-126, gnl|tetNig1|chr1 (8454921-8454766) | |
| 1-126, gnl|xenTro1|scaffold_482 (791426-791266) | |
| 242-416, gnl|bosTau2|chrX (20418532-20418711) | |
| 242-416, gnl|Hg17|chrX (69435908-69436145) | |
| 242-416, gnl|Mm7|chrX (96065588-96065804) | |
| 476-855, gnl|bosTau2|chrX (20418711-20419094) | |
| 476-855, gnl|Hg17|chrX (69436145-69436535) | |
| 476-855, gnl|Mm7|chrX (96065804-96066193) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-126, gnl|bosTau2|chrX (20417805-20417930) | |
| 1-126, gnl|canFam2|chrX (57800511-57800671) | |
| 1-126, gnl|danRer3|chr14 (56769804-56769964) | |
| 1-126, gnl|dasNov1|scaffold_39733 (8116-7956) | |
| 1-126, gnl|echTel1|scaffold_210070 (3031-3191) | |
| 1-126, gnl|fr1|chrUn (268655642-268655482) | |
| 1-126, gnl|galGal2|chr4 (2348895-2348735) | |
| 1-126, gnl|hg17|chrX (69435171-69435331) | |
| 1-126, gnl|Hg17|chrX (69435200-69435325) | |
| 1-126, gnl|loxAfr1|scaffold_57910 (6072-5935) | |
| 1-126, gnl|mm7|chrX (96064813-96064973) | |
| 1-126, gnl|Mm7|chrX (96064842-96064967) | |
| 1-126, gnl|monDom2|scaffold_188 (717735-717866) | |
| 1-126, gnl|oryCun1|scaffold_196874 (46322-46482) | |
| 1-126, gnl|panTro1|chrX (71602692-71602852) | |
| 1-126, gnl|rheMac2|chrX (69405776-69405936) | |
| 1-126, gnl|rn3|chrX (88825283-88825443) | |
| 1-126, gnl|tetNig1|chr1 (8454921-8454766) | |
| 1-126, gnl|xenTro1|scaffold_482 (791426-791266) | |
| 242-416, gnl|bosTau2|chrX (20418532-20418711) | |
| 242-416, gnl|Hg17|chrX (69435908-69436145) | |
| 242-416, gnl|Mm7|chrX (96065588-96065804) | |
| 476-855, gnl|bosTau2|chrX (20418711-20419094) | |
| 476-855, gnl|Hg17|chrX (69436145-69436535) | |
| 476-855, gnl|Mm7|chrX (96065804-96066193) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| cje (0.165235) |