Non-Coding RNA Search

Ss1.1-Pig4-TMW8059B22.3

Sequence:


               
               CACATTTAAAAAAAGTTATCTTCATTGGATAGAATTGAATGGTGGTCGCTGATAGGAATA
GGGCGTCCTCTCTTATCTCTGTCTCTGACTCTTTTCTCTTTCTCTTTTTTGTCATGAGAC
TGTGTGTGACAGGGCCACCTGTCTTTTTATTTTTTTTTTCTTAACTTTTTTTTTTTTTTT
TTAAATGTGTAGGTGCATGTCTTGGGGATTTAAAAATTTCAAGGCTGGTTTACTTATGCA
AAGCATGCCTACGTCTGGAATACTTAGGGAAAGAAAGCGACTCCATGTTGTCCGAATTCC
TCAAGGGACAGAAAAAAATTGGAGACTGTTGAAATGCAGATTTGAAGTAATTTTTTAAAA
TATTATTTTGGGTTCTGCGACATTATTGTGAAAAATTAAAGTTGTTGTGCAATACTTAAT
TCAGACATGTACCACAAGTTAACGGTAGACTAACACTGGGGGGCGGGGTCTAGGCATCAT
GCTTTTGTCAGCATACTCTTGAGCTTTTAAGTCTACTATGTCTGAACTGTGGTTTCTTGT
TTATCCTTTTTTTTCCTTAGTTGGACTGTAATGTATGGTCTGTCAACCTGTGAATCTTTA
AAGTATGATTCAGGTATTGTTGTATTCTTTACTGTGTAATAAAAAGTTTAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACATTTAAAAAAAGTTATCTTCATTGGATAGAATTGAATGGTGGTCGCTGATAGGAATA
GGGCGTCCTCTCTTATCTCTGTCTCTGACTCTTTTCTCTTTCTCTTTTTTGTCATGAGAC
TGTGTGTGACAGGGCCACCTGTCTTTTTATTTTTTTTTTCTTAACTTTTTTTTTTTTTTT
TTAAATGTGTAGGTGCATGTCTTGGGGATTTAAAAATTTCAAGGCTGGTTTACTTATGCA
AAGCATGCCTACGTCTGGAATACTTAGGGAAAGAAAGCGACTCCATGTTGTCCGAATTCC
TCAAGGGACAGAAAAAAATTGGAGACTGTTGAAATGCAGATTTGAAGTAATTTTTTAAAA
TATTATTTTGGGTTCTGCGACATTATTGTGAAAAATTAAAGTTGTTGTGCAATACTTAAT
TCAGACATGTACCACAAGTTAACGGTAGACTAACACTGGGGGGCGGGGTCTAGGCATCAT
GCTTTTGTCAGCATACTCTTGAGCTTTTAAGTCTACTATGTCTGAACTGTGGTTTCTTGT
TTATCCTTTTTTTTCCTTAGTTGGACTGTAATGTATGGTCTGTCAACCTGTGAATCTTTA
AAGTATGATTCAGGTATTGTTGTATTCTTTACTGTGTAATAAAAAGTTTAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-656, gnl|bosTau2|chr14 (45336547-45335883)
               

               
               8-656, gnl|Hg17|chr8 (93038547-93037905)
               

               
               8-656, gnl|Mm7|chr4 (13820142-13820795)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-656, gnl|bosTau2|chr14 (45336547-45335883)
               

               
               8-656, gnl|Hg17|chr8 (93038547-93037905)
               

               
               8-656, gnl|Mm7|chr4 (13820142-13820795)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ecc (0.345105)
               

               
               cbe (0.239234)
               

               
               fcc (0.197785)
               

               
               gul (0.177588)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.345105)
               

               
               cbe (0.239234)
               

               
               fcc (0.197785)
               

               
               gul (0.177588)

	8-656, gnl\|bosTau2\|chr14 (45336547-45335883)
	8-656, gnl\|Hg17\|chr8 (93038547-93037905)
	8-656, gnl\|Mm7\|chr4 (13820142-13820795)