Ss1.1-Pig4-TMW8059C18.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAACGAGCAGTGGCCACTAAGTTTGTGACAAAGAAGCTGATGAAGCGTGACCAGGTCAC CCACGAGCTTGGAATCCTGCAGAACCTCCAGCACCCGCTGCTTATTGGCCTCCTAGACAC CTTCGAGACCCCCACCAGCTACGTCCTGGTTTTGGAAATGGCTGACCAGGGACGGCTCCT GGACTGTGTGGTGCGATGGGGAAACCTCACGGAAGGGAAGATCAGGGCATATCTGGGGGA GGTTCTAGAAGGTGTCCGATACCTTCACAACTGCAGGATAGCACACCTGGACCTAAAGCC CGAAAACATCCTCGTGGATCAGAGTTCAGCCAAGCCAACCATCAAGCTGGCCGACTTTGG AGATGCTGTCCAACTCAACACGACCTACCACATCCACCAGTTGCTGGGGAACCCCGAATT TGCAGCCCCCGAAATCATCCTGGGGAACCCGGTCTCCCTGACCTCGGACACGTGGAGCGT TGGAGTGCTGGCCTATGTGCTTCTTAGCGGCGTGTCCCCCTTCCTGGACGACAGTGTGGA AGAGACCTGCCTGAACATTTGCCGACTAGACTTTAGTTTCCCAGATGACTACTTCCAAGG AGTGAGCCAGAGGGCCAAGGACTTCGTGTGTTTCCTCCTCCACGAGGACCCCGCCAAGCG GCCCTCGGCTGCGCTGGCCCTCCAGGAGCAGTGGCTGCAGGCGGGCCATGGCCACGGCCA TGGCAAAGGTTCAGGCGTCCTCGACACATCCAGACTGACCTCCTTCATTGAGCGGCGCAA ACACCAGAACGATGTTCGACCTATCCGTAGCATCAAAAACTTCTTACAAAGCAGGCTTTT GCCTCGAGTTTGACCTATCTTGAAGTTCTTTCTCATTCTCTTTCACCTGCCAATCAGCTG TTAATTTGACTTCCGAAGAGAAACACAAACCAACATAACTGATCAGCTGCCGTAGTTGAT CGTGTGAAACTGCATTCCGAGTGAGCTGAGCTCGGCAGTGCCTGGGACTCGGGCTGCAAG CCATGCTGGGGTGGGGGACCTTCTCGAACACTCTGCGAGGGCGGAGACAGCATTGCTGTG TCACAGTCTTTTATTCAGGTTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAACGAGCAGTGGCCACTAAGTTTGTGACAAAGAAGCTGATGAAGCGTGACCAGGTCAC CCACGAGCTTGGAATCCTGCAGAACCTCCAGCACCCGCTGCTTATTGGCCTCCTAGACAC CTTCGAGACCCCCACCAGCTACGTCCTGGTTTTGGAAATGGCTGACCAGGGACGGCTCCT GGACTGTGTGGTGCGATGGGGAAACCTCACGGAAGGGAAGATCAGGGCATATCTGGGGGA GGTTCTAGAAGGTGTCCGATACCTTCACAACTGCAGGATAGCACACCTGGACCTAAAGCC CGAAAACATCCTCGTGGATCAGAGTTCAGCCAAGCCAACCATCAAGCTGGCCGACTTTGG AGATGCTGTCCAACTCAACACGACCTACCACATCCACCAGTTGCTGGGGAACCCCGAATT TGCAGCCCCCGAAATCATCCTGGGGAACCCGGTCTCCCTGACCTCGGACACGTGGAGCGT TGGAGTGCTGGCCTATGTGCTTCTTAGCGGCGTGTCCCCCTTCCTGGACGACAGTGTGGA AGAGACCTGCCTGAACATTTGCCGACTAGACTTTAGTTTCCCAGATGACTACTTCCAAGG AGTGAGCCAGAGGGCCAAGGACTTCGTGTGTTTCCTCCTCCACGAGGACCCCGCCAAGCG GCCCTCGGCTGCGCTGGCCCTCCAGGAGCAGTGGCTGCAGGCGGGCCATGGCCACGGCCA TGGCAAAGGTTCAGGCGTCCTCGACACATCCAGACTGACCTCCTTCATTGAGCGGCGCAA ACACCAGAACGATGTTCGACCTATCCGTAGCATCAAAAACTTCTTACAAAGCAGGCTTTT GCCTCGAGTTTGACCTATCTTGAAGTTCTTTCTCATTCTCTTTCACCTGCCAATCAGCTG TTAATTTGACTTCCGAAGAGAAACACAAACCAACATAACTGATCAGCTGCCGTAGTTGAT CGTGTGAAACTGCATTCCGAGTGAGCTGAGCTCGGCAGTGCCTGGGACTCGGGCTGCAAG CCATGCTGGGGTGGGGGACCTTCTCGAACACTCTGCGAGGGCGGAGACAGCATTGCTGTG TCACAGTCTTTTATTCAGGTTTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-160, gnl|bosTau2|chr20 (34805975-34806134) | |
| 1-160, gnl|canFam2|chr34 (3284306-3284063) | |
| 1-160, gnl|danRer3|chr19 (58479154-58479390) | |
| 1-160, gnl|dasNov1|scaffold_36191 (9469-9712) | |
| 1-160, gnl|echTel1|scaffold_313955 (3058-3301) | |
| 1-160, gnl|fr1|chrUn (788963-789195) | |
| 1-160, gnl|galGal2|chr2 (76281086-76280842) | |
| 1-160, gnl|hg17|chr5 (14557482-14557725) | |
| 1-160, gnl|Hg17|chr5 (14557544-14557703) | |
| 1-160, gnl|loxAfr1|scaffold_111174 (1059-1304) | |
| 1-160, gnl|mm7|chr15 (27838725-27838482) | |
| 1-160, gnl|Mm7|chr15 (27838661-27838502) | |
| 1-160, gnl|monDom2|scaffold_4 (36417997-36418242) | |
| 1-160, gnl|panTro1|chr4 (14974805-14975048) | |
| 1-160, gnl|rheMac2|chr6 (14686722-14686965) | |
| 1-160, gnl|rn3|chr2 (79584669-79584425) | |
| 1-160, gnl|tetNig1|chr8 (4004300-4004095) | |
| 1-160, gnl|xenTro1|scaffold_4 (3450987-3451228) | |
| 357-1037, gnl|bosTau2|chr10 (22158285-22157595) | |
| 357-1037, gnl|Hg17|chr5 (14561047-14561709) | |
| 357-1037, gnl|Mm7|chr15 (27836096-27835427) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-160, gnl|bosTau2|chr20 (34805975-34806134) | |
| 1-160, gnl|canFam2|chr34 (3284306-3284063) | |
| 1-160, gnl|danRer3|chr19 (58479154-58479390) | |
| 1-160, gnl|dasNov1|scaffold_36191 (9469-9712) | |
| 1-160, gnl|echTel1|scaffold_313955 (3058-3301) | |
| 1-160, gnl|fr1|chrUn (788963-789195) | |
| 1-160, gnl|galGal2|chr2 (76281086-76280842) | |
| 1-160, gnl|hg17|chr5 (14557482-14557725) | |
| 1-160, gnl|Hg17|chr5 (14557544-14557703) | |
| 1-160, gnl|loxAfr1|scaffold_111174 (1059-1304) | |
| 1-160, gnl|mm7|chr15 (27838725-27838482) | |
| 1-160, gnl|Mm7|chr15 (27838661-27838502) | |
| 1-160, gnl|monDom2|scaffold_4 (36417997-36418242) | |
| 1-160, gnl|panTro1|chr4 (14974805-14975048) | |
| 1-160, gnl|rheMac2|chr6 (14686722-14686965) | |
| 1-160, gnl|rn3|chr2 (79584669-79584425) | |
| 1-160, gnl|tetNig1|chr8 (4004300-4004095) | |
| 1-160, gnl|xenTro1|scaffold_4 (3450987-3451228) | |
| 357-1037, gnl|bosTau2|chr10 (22158285-22157595) | |
| 357-1037, gnl|Hg17|chr5 (14561047-14561709) | |
| 357-1037, gnl|Mm7|chr15 (27836096-27835427) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| ese (0.126502) |