Non-Coding RNA Search

Ss1.1-Pig4-TMW8059D07.3

Sequence:


               
               TTCTTAAGATAAATCAGGATTCTCTGCTTTTTCACTGAAATTAAACATATTTGAAAAAAT
ACTTTACAAAGGTCAGGTATTAAATAAAATCCCAGAGAGATTTACTTATTTAATAAAAAC
AATGGCTTATGTCATTTTGTAATAAGGCATGTGTCTTCATTTGCAGAAAATTATATAATC
ATTACTAATAACTATTAAACTCAAATACAAATCCTAGTTTGGACCTTATTTCAACATATT
CTGTGAAGCATTTATATAATAACTATATCTTAAAAATGAATCAGTAAAATTTTAGAGAAA
GTAAATTGTAATTGTTCAAAACTTTGCAACATAGAACTGTCATTCTTGACAAGGCTGTTT
TGAAATTGTTTAAAAGTTAATTTATAAATGTATAAATTTATGTACTTTGGCTCTTTACTA
TTATATGTTAGAACTGGAAGAGACCTTAAGGACAATATATGCAGTTCAATGCCCTTTTTT
TAATAGATAAGGAAAATGAAATCCTGAAAGGTGAATTTAATTAATTTATCTATTAAAGAT
GAATCAATTAATTACTTGGTGAAAGTTACACAGTGACAGTTACTTATAATTGCTGATATG
ATTAATTGTAATAAAATAACAAAACAGTGTTTACTGTAGAAACTAGTACAGGATTCTCCC
TCTAATAGGAAGTAGAAAGTATTACTGAAAGTATATCCAAAATAGGAGTTCCCCCTTTTG
TACAGTGGATTAAGAATCTGACTACAGCTGCTGGGGTCTCTGAAGAGAGACCATCCCCAG
CCAGCACAGCCAGTTAAAGGATCTGGCATTGTCACACACAACTATGACATAGGTCACATC
TGCAGCTCAGATTCAGTTCCTGGTCTGGGAACTTTCATATGCCATGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTTAAGATAAATCAGGATTCTCTGCTTTTTCACTGAAATTAAACATATTTGAAAAAAT
ACTTTACAAAGGTCAGGTATTAAATAAAATCCCAGAGAGATTTACTTATTTAATAAAAAC
AATGGCTTATGTCATTTTGTAATAAGGCATGTGTCTTCATTTGCAGAAAATTATATAATC
ATTACTAATAACTATTAAACTCAAATACAAATCCTAGTTTGGACCTTATTTCAACATATT
CTGTGAAGCATTTATATAATAACTATATCTTAAAAATGAATCAGTAAAATTTTAGAGAAA
GTAAATTGTAATTGTTCAAAACTTTGCAACATAGAACTGTCATTCTTGACAAGGCTGTTT
TGAAATTGTTTAAAAGTTAATTTATAAATGTATAAATTTATGTACTTTGGCTCTTTACTA
TTATATGTTAGAACTGGAAGAGACCTTAAGGACAATATATGCAGTTCAATGCCCTTTTTT
TAATAGATAAGGAAAATGAAATCCTGAAAGGTGAATTTAATTAATTTATCTATTAAAGAT
GAATCAATTAATTACTTGGTGAAAGTTACACAGTGACAGTTACTTATAATTGCTGATATG
ATTAATTGTAATAAAATAACAAAACAGTGTTTACTGTAGAAACTAGTACAGGATTCTCCC
TCTAATAGGAAGTAGAAAGTATTACTGAAAGTATATCCAAAATAGGAGTTCCCCCTTTTG
TACAGTGGATTAAGAATCTGACTACAGCTGCTGGGGTCTCTGAAGAGAGACCATCCCCAG
CCAGCACAGCCAGTTAAAGGATCTGGCATTGTCACACACAACTATGACATAGGTCACATC
TGCAGCTCAGATTCAGTTCCTGGTCTGGGAACTTTCATATGCCATGTG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               168-696, gnl|bosTau2|chr27 (9000640-9001179)
               

               
               168-696, gnl|Hg17|chr5 (102913549-102913088)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               168-696, gnl|bosTau2|chr27 (9000640-9001179)
               

               
               168-696, gnl|Hg17|chr5 (102913549-102913088)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               nco (0.161734)
               

               
               bfe (0.149858)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               bfe (0.149858)
               

               
               pgl (0.118483)

	168-696, gnl\|bosTau2\|chr27 (9000640-9001179)
	168-696, gnl\|Hg17\|chr5 (102913549-102913088)