Non-Coding RNA Search

Ss1.1-Pig4-TMW8059D16.5

Sequence:


               
               GAACTGTCAGAGCAGGAGCCAGGCACGACATGATGCCAGGAGGGCCACCAGGGCTGGGGC
CCCACCTCCAGAGTAAGCTGAAGTAGCTGGGAGTCATGGTTAGTTGCCAGAAGGATTTCT
TCTTCCTCAGGATCACCTGTGGCCTTCAAGGGACAGCATCTTCCATGTCCTCGTGAATGA
CCCAAGGAAGGGAGGAGTAGCGAGAGAGCAGGTTCAGAATCAGATGAGCCAAGTTGGAAT
TCCAACTCTGCAGGCACTGGCTGGGTGACCCTGAGGAAAGCATTTACCTCTCCGAACCTC
ACTTTCTCTCATGTGAAAAGCAAGGAAAATGTTCACGTGACAAGGTGGCTGTGATTAAAT
GTGAAATAATGCACAGACCAAGCAACCGTCACGGTGCGCCCTCGTGCGCGTGCAGATGGT
GGCTGCCCTGTGGAGAAGCCTCTGGCCGTGGGCCCTGTAAAGATCTGCTTTCAGTCTGTT
AGAAGGGAGACCCCATGGGGCGGCATGTGCTACCACCTGAATGCCTCTCAGATGTGGTTG
GCAGGGAATGTGCTTGTCAAGCATACCGTCCTTGCAAGGGGTGGGGGGGATGTTAGTGGA
AATATCGGGTGGAAGAGAAAAGACAGTAAAAACTCCTTTGTACAACTTTCAGAATCCTAT
CATTGGAGGCCTGTTTGAAGCATCTTCCCCACCACGGAAAAAAAGAATGAATGACAGAGT
TCCCTGGTAGTACAGCGAGTTAAAGACCCAGCGTTGTCACTGCTGTGGCTCGGGTCGTAG
CTGGGGCCTGGGTTCTGTCTCTGGCCCCAGAACTTCCAAATGCCTTGGGTTATGCCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTGTCAGAGCAGGAGCCAGGCACGACATGATGCCAGGAGGGCCACCAGGGCTGGGGC
CCCACCTCCAGAGTAAGCTGAAGTAGCTGGGAGTCATGGTTAGTTGCCAGAAGGATTTCT
TCTTCCTCAGGATCACCTGTGGCCTTCAAGGGACAGCATCTTCCATGTCCTCGTGAATGA
CCCAAGGAAGGGAGGAGTAGCGAGAGAGCAGGTTCAGAATCAGATGAGCCAAGTTGGAAT
TCCAACTCTGCAGGCACTGGCTGGGTGACCCTGAGGAAAGCATTTACCTCTCCGAACCTC
ACTTTCTCTCATGTGAAAAGCAAGGAAAATGTTCACGTGACAAGGTGGCTGTGATTAAAT
GTGAAATAATGCACAGACCAAGCAACCGTCACGGTGCGCCCTCGTGCGCGTGCAGATGGT
GGCTGCCCTGTGGAGAAGCCTCTGGCCGTGGGCCCTGTAAAGATCTGCTTTCAGTCTGTT
AGAAGGGAGACCCCATGGGGCGGCATGTGCTACCACCTGAATGCCTCTCAGATGTGGTTG
GCAGGGAATGTGCTTGTCAAGCATACCGTCCTTGCAAGGGGTGGGGGGGATGTTAGTGGA
AATATCGGGTGGAAGAGAAAAGACAGTAAAAACTCCTTTGTACAACTTTCAGAATCCTAT
CATTGGAGGCCTGTTTGAAGCATCTTCCCCACCACGGAAAAAAAGAATGAATGACAGAGT
TCCCTGGTAGTACAGCGAGTTAAAGACCCAGCGTTGTCACTGCTGTGGCTCGGGTCGTAG
CTGGGGCCTGGGTTCTGTCTCTGGCCCCAGAACTTCCAAATGCCTTGGGTTATGCCAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-672, gnl|bosTau2|chr19 (38853815-38853148)
               

               
               1-672, gnl|Mm7|chr11 (101166411-101167047)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-672, gnl|bosTau2|chr19 (38853815-38853148)
               

               
               1-672, gnl|Mm7|chr11 (101166411-101167047)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-672, gnl\|bosTau2\|chr19 (38853815-38853148)
	1-672, gnl\|Mm7\|chr11 (101166411-101167047)