Non-Coding RNA Search

Ss1.1-Pig4-TMW8059I08.5

Sequence:


               
               GGTTCTTCTTCTACGCAGGCTGGCTCAAGGTAGCTGAGCAGCTGATCAACCCCTTTGGAG
AGGACGACGACGACTTTGAGACCAACTTTCTGATCGACCGCGGGTTCCAGGTGTCAATGC
TGGCCGTGGATGAGATGTACGACGACCTAGCCATGCTGGAGAAGGACCTGTACTGGGATG
CAGCAGAAGCTCGCGCTCCCTATACCGCAGCCACCGCTTTCTTGAGGCAGCAGCCCTTCC
AGGGCTCCACCTTCGACATCACGTTGGCCAAGGAGGACATGCAATTCCAGTGGCAGGAGG
GCATGGACGCGCCACTGGGGGATGCACAAGGCGACTTACTGCAGCGTCTCCTGCCCATGG
GCGCGGGCATGACCTCGGGAGGCCTGCTAGGTCGGCGCCTGTCCTTGCTGCGCCGAAAGA
ACAGCTGCGTATCAGAGGCATCTGTGGCTGGCAGCTGCGCGTGCTCGGGCGCCCCTGATG
GTACGGCTCCAGAGTGCGGTTGCGGGGACACACTGCTGGATGTAGGCCAGCGGGAGCCGG
AGTCTGAGCCACCCCCTGGCCTGGAGCCTCCTGTCCCAGGGCTGCCCACCGAGCCCTTCA
CTGTTGCGCCAATCCCTGGGTCCCGAGGGCCGGCTCCACCCTGGCTGCCCAGCCCCATTG
GTGAGGAGGAGGAAAATCTAGCCTGAGACCTTTGAACACTGGATCCCCAAGGACAGGGGA
TGGAATCCCCTCACAGCCCACAGGCAGCAGTTTGGGTCTGCATGAGCGGTGTGTTGTGGC
AGCTTCTTACCTGCCTGCTAAGTGTACCTGCCTTTACATTTGGCAGAGATTTGGAGAGCC
TCTTGTGGGCCATGCACTAAACTAAGGGTGGGGTGTTCTTCCAGCTTCTCTGAACTGTGG
GTTCTTATCACCTGCAGCTTTACTTCCTACCCCCTCCTGTGTGAGAGGCCACTATTGCCT
TTCTTCTCTTTAAAATGGACATATGAATGAGTGCTCACCTCATTGAGTTGTGAGGATGAA
ATGAAATGCAGCTTTAAAGTGTTTGGTTTTATAATAGGTGCTCAATAAAATGTCAGTGGT
TTTTACCCCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTCTTCTTCTACGCAGGCTGGCTCAAGGTAGCTGAGCAGCTGATCAACCCCTTTGGAG
AGGACGACGACGACTTTGAGACCAACTTTCTGATCGACCGCGGGTTCCAGGTGTCAATGC
TGGCCGTGGATGAGATGTACGACGACCTAGCCATGCTGGAGAAGGACCTGTACTGGGATG
CAGCAGAAGCTCGCGCTCCCTATACCGCAGCCACCGCTTTCTTGAGGCAGCAGCCCTTCC
AGGGCTCCACCTTCGACATCACGTTGGCCAAGGAGGACATGCAATTCCAGTGGCAGGAGG
GCATGGACGCGCCACTGGGGGATGCACAAGGCGACTTACTGCAGCGTCTCCTGCCCATGG
GCGCGGGCATGACCTCGGGAGGCCTGCTAGGTCGGCGCCTGTCCTTGCTGCGCCGAAAGA
ACAGCTGCGTATCAGAGGCATCTGTGGCTGGCAGCTGCGCGTGCTCGGGCGCCCCTGATG
GTACGGCTCCAGAGTGCGGTTGCGGGGACACACTGCTGGATGTAGGCCAGCGGGAGCCGG
AGTCTGAGCCACCCCCTGGCCTGGAGCCTCCTGTCCCAGGGCTGCCCACCGAGCCCTTCA
CTGTTGCGCCAATCCCTGGGTCCCGAGGGCCGGCTCCACCCTGGCTGCCCAGCCCCATTG
GTGAGGAGGAGGAAAATCTAGCCTGAGACCTTTGAACACTGGATCCCCAAGGACAGGGGA
TGGAATCCCCTCACAGCCCACAGGCAGCAGTTTGGGTCTGCATGAGCGGTGTGTTGTGGC
AGCTTCTTACCTGCCTGCTAAGTGTACCTGCCTTTACATTTGGCAGAGATTTGGAGAGCC
TCTTGTGGGCCATGCACTAAACTAAGGGTGGGGTGTTCTTCCAGCTTCTCTGAACTGTGG
GTTCTTATCACCTGCAGCTTTACTTCCTACCCCCTCCTGTGTGAGAGGCCACTATTGCCT
TTCTTCTCTTTAAAATGGACATATGAATGAGTGCTCACCTCATTGAGTTGTGAGGATGAA
ATGAAATGCAGCTTTAAAGTGTTTGGTTTTATAATAGGTGCTCAATAAAATGTCAGTGGT
TTTTACCCCTAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               108-270, gnl|bosTau2|chr7 (8455858-8456023)
               

               
               108-270, gnl|Hg17|chr19 (12727952-12728117)
               

               
               108-270, gnl|Mm7|chr8 (83597732-83597567)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               108-270, gnl|bosTau2|chr7 (8455858-8456023)
               

               
               108-270, gnl|Hg17|chr19 (12727952-12728117)
               

               
               108-270, gnl|Mm7|chr8 (83597732-83597567)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               col (0.195008)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)

	108-270, gnl\|bosTau2\|chr7 (8455858-8456023)
	108-270, gnl\|Hg17\|chr19 (12727952-12728117)
	108-270, gnl\|Mm7\|chr8 (83597732-83597567)