Ss1.1-Pig4-TMW8059J02.5
|
GCGGGGCCTCCGCTAACCATGGCCGGCGAGCTGGAGGGCTCCAAACCCCTCAGCGGGCTG
CTGAGCGGCCTGGCCCAGGACGCTTTCCACGGGCACCCAGGCATCACAGAGGAGCTGCTG
CGGAGCCAGCTCTATCCAGAGATGCCACCTGAGGAGTTCCGCCCCTTTCTGGCGAAGATG
AGGGGGATCCTTAAGTCTATTGCATCTGCAGACATGGATTTCAACCAGCTGGAGGCATTC
TTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTTATTTCC
AAGTTTTGGAAGAACCATAAGACAAAAATCAGAGAAAGCCTCATGAACCAGAGCCGCTGG
GACAGTGGGCTTCGGGGCTTGAGCTGGAGAGTTGATGGCAAATCTCAGTCAAGGCACTCA
GCTCAAATACACACTCCTGTTGCCATAATGGAGCTGGAAATAGGAAAAAGTGGGCAGGAA
TCTGAATTTCTGTGTTTGGAATTTGATGAGGTCAAGGTCAACCAAGTTCTGAAGAAGCTC
TCAGAGGTAGAAGAAAGTATCAGCATACTGATGCAGCCAGCCTAGATGAAGATGGAGTTG
CTGAAGTAAAGCAAAGGTGTTCGGGATCCCTCCCCAGGAACTTTTTTTTTTTTTGATCTT
GTTCTCCCAACAGTATTAAATCCTCAAATTCAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGGGCCTCCGCTAACCATGGCCGGCGAGCTGGAGGGCTCCAAACCCCTCAGCGGGCTG
CTGAGCGGCCTGGCCCAGGACGCTTTCCACGGGCACCCAGGCATCACAGAGGAGCTGCTG
CGGAGCCAGCTCTATCCAGAGATGCCACCTGAGGAGTTCCGCCCCTTTCTGGCGAAGATG
AGGGGGATCCTTAAGTCTATTGCATCTGCAGACATGGATTTCAACCAGCTGGAGGCATTC
TTGACTGCTCAAACCAAAAAGCAAGGTGGGATCACATCTGACCAAGCTGCTGTTATTTCC
AAGTTTTGGAAGAACCATAAGACAAAAATCAGAGAAAGCCTCATGAACCAGAGCCGCTGG
GACAGTGGGCTTCGGGGCTTGAGCTGGAGAGTTGATGGCAAATCTCAGTCAAGGCACTCA
GCTCAAATACACACTCCTGTTGCCATAATGGAGCTGGAAATAGGAAAAAGTGGGCAGGAA
TCTGAATTTCTGTGTTTGGAATTTGATGAGGTCAAGGTCAACCAAGTTCTGAAGAAGCTC
TCAGAGGTAGAAGAAAGTATCAGCATACTGATGCAGCCAGCCTAGATGAAGATGGAGTTG
CTGAAGTAAAGCAAAGGTGTTCGGGATCCCTCCCCAGGAACTTTTTTTTTTTTTGATCTT
GTTCTCCCAACAGTATTAAATCCTCAAATTCAAAAAAAAAAAAAAAAA
|
|
gi|4154357|gb|AAD04948.1| |
Protein identifier
|
gi|4154357|gb|AAD04948.1| |
|
190-478, gnl|bosTau2|chr11 (40337266-40337554) |
|
190-478, gnl|canFam2|chr10 (65118093-65118341) |
|
190-478, gnl|danRer3|chr2 (13232513-13232752) |
|
190-478, gnl|dasNov1|scaffold_88471 (3434-3692) |
|
190-478, gnl|echTel1|scaffold_196669 (3233-2979) |
|
190-478, gnl|fr1|chrUn (185660098-185659871) |
|
190-478, gnl|galGal2|chr3 (8181299-8181047) |
|
190-478, gnl|hg17|chr2 (62139430-62139688) |
|
190-478, gnl|Hg17|chr2 (62139476-62139769) |
|
190-478, gnl|loxAfr1|scaffold_10284 (7045-7299) |
|
190-478, gnl|mm7|chr11 (22908757-22908499) |
|
190-478, gnl|Mm7|chr11 (22908706-22908416) |
|
190-478, gnl|monDom2|scaffold_1 (27091492-27091749) |
|
190-478, gnl|oryCun1|scaffold_196186 (640-886) |
|
190-478, gnl|panTro1|chr12 (64355536-64355794) |
|
190-478, gnl|rn3|chr14 (103656035-103655780) |
|
190-478, gnl|tetNig1|chrUn_random (105358513-105358725) |
|
190-478, gnl|xenTro1|scaffold_562 (662594-662838) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
190-478, gnl|bosTau2|chr11 (40337266-40337554) |
|
190-478, gnl|canFam2|chr10 (65118093-65118341) |
|
190-478, gnl|danRer3|chr2 (13232513-13232752) |
|
190-478, gnl|dasNov1|scaffold_88471 (3434-3692) |
|
190-478, gnl|echTel1|scaffold_196669 (3233-2979) |
|
190-478, gnl|fr1|chrUn (185660098-185659871) |
|
190-478, gnl|galGal2|chr3 (8181299-8181047) |
|
190-478, gnl|hg17|chr2 (62139430-62139688) |
|
190-478, gnl|Hg17|chr2 (62139476-62139769) |
|
190-478, gnl|loxAfr1|scaffold_10284 (7045-7299) |
|
190-478, gnl|mm7|chr11 (22908757-22908499) |
|
190-478, gnl|Mm7|chr11 (22908706-22908416) |
|
190-478, gnl|monDom2|scaffold_1 (27091492-27091749) |
|
190-478, gnl|oryCun1|scaffold_196186 (640-886) |
|
190-478, gnl|panTro1|chr12 (64355536-64355794) |
|
190-478, gnl|rn3|chr14 (103656035-103655780) |
|
190-478, gnl|tetNig1|chrUn_random (105358513-105358725) |
|
190-478, gnl|xenTro1|scaffold_562 (662594-662838) |
|
clu (0.957167) |
|
cte (0.87822) |
|
fbs (0.701385) |
|
tes (0.623441) |
|
pgl (0.592417) |
|
fty (0.351679) |
|
ill (0.351185) |
|
fhi (0.339155) |
|
csp (0.322373) |
|
spl (0.286369) |
|
fce (0.271592) |
|
pla (0.267344) |
|
ese (0.253004) |
|
bla (0.248694) |
|
spc (0.226732) |
|
mas (0.210305) |
|
eje (0.197668) |
|
nep (0.183925) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
mcp (0.170648) |
|
cli (0.152812) |
|
cag (0.151194) |
|
fat (0.147427) |
|
hyp (0.142837) |
|
csk (0.140746) |
|
che (0.136314) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
sug (0.127291) |
|
thg (0.126791) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
med (0.116252) |
|
nbm (0.0993246) |
|
clu (0.957167) |
|
cte (0.87822) |
|
fbs (0.701385) |
|
tes (0.623441) |
|
pgl (0.592417) |
|
fty (0.351679) |
|
ill (0.351185) |
|
fhi (0.339155) |
|
csp (0.322373) |
|
spl (0.286369) |
|
fce (0.271592) |
|
pla (0.267344) |
|
ese (0.253004) |
|
bla (0.248694) |
|
spc (0.226732) |
|
mas (0.210305) |
|
eje (0.197668) |
|
nep (0.183925) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
mcp (0.170648) |
|
cli (0.152812) |
|
cag (0.151194) |
|
fat (0.147427) |
|
hyp (0.142837) |
|
csk (0.140746) |
|
che (0.136314) |
|
ssp (0.13552) |
|
ste (0.135208) |
|
lyg (0.133103) |
|
ova (0.129132) |
|
sug (0.127291) |
|
thg (0.126791) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
med (0.116252) |
|
nbm (0.0993246) |
