Non-Coding RNA Search

Ss1.1-Pig4-TMW8059M05.5

Sequence:


               
               AGGTAAAGATTTCCTAGAATTGAAGCAGATGACATCTGATGAGCACTTTCCCAGGGTGTC
TAGACAAGGCCTGTTAGAAGGTTTAGAATTCACAGAAGTGTCTCTCTTTCATCTAGACTA
TAAAACTGACTCTAGATTCTTATCCAAATTCAGTCTCAGATTTTGCAACCTACGGTCTGT
ATTATTGATAAAACATCTGATACCAAACAATTCCTTTTGAGATAACAATACTGTTTAATT
ACTTCATGTTTATTCCTGCACTGTCATTTCAACATTCTTGTTTAATTCCTTCAGTTTTGA
GTATGCCTTTGCTGTATTCACTATTCTAAGATACAGACTTTAGATGGGAAATTCCTGAGA
ACTCTCCCTCCTACCCCTCCTTGTTACTCATATGTGATTGAAAACCTGTGTACACCCAGG
AAAGGTCCTTCCTGGCATCAAGGGACAAAAGGCCACTGAATGCTGGTTGAAACAAACAAA
ACAAAACAAAATGAAACAAAAAAATCTGACTCTTAATCAGCAGTGCTTTTGGAGAAAGAT
CTTGATTAAAAGGGGGAAATGTGAAAATGAATAAAGGAAAACCTCACTAAAATGGAGTCA
GGAAGCCAGAAGGGGGAGTACTGTCAATATAGATTCCCAACAAGAAGAATCAATACAGAT
CTCTGGCAAGAAGTAACACTACTACTGCCAACAAGAGGAAGAAAGATTTTCTTCTAACAG
CCCCTCTGCCCTTCTCTTCTATAAAAGAGTTCCCTCTCTTTGTTTAATGTGACTTACAAG
TGGTTCACCAGTTGCATGTCCCAAATTGCAATTCTTTGCTGCTCCCAAATAAATGTGTTT
TGCTGGTAAAAAATCTGGCTGTTTTATTGCCTTAGGTTAACAGCTGCTTTTGTGGCCACG
TCTCAATAGAAAATGAGAAGTCTCTCCAGTGTCCCTACACGTGGGAGGAGAATATTCCCT
TTCCCACCAATAAGCAGACAAGACCATCTGCTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGTAAAGATTTCCTAGAATTGAAGCAGATGACATCTGATGAGCACTTTCCCAGGGTGTC
TAGACAAGGCCTGTTAGAAGGTTTAGAATTCACAGAAGTGTCTCTCTTTCATCTAGACTA
TAAAACTGACTCTAGATTCTTATCCAAATTCAGTCTCAGATTTTGCAACCTACGGTCTGT
ATTATTGATAAAACATCTGATACCAAACAATTCCTTTTGAGATAACAATACTGTTTAATT
ACTTCATGTTTATTCCTGCACTGTCATTTCAACATTCTTGTTTAATTCCTTCAGTTTTGA
GTATGCCTTTGCTGTATTCACTATTCTAAGATACAGACTTTAGATGGGAAATTCCTGAGA
ACTCTCCCTCCTACCCCTCCTTGTTACTCATATGTGATTGAAAACCTGTGTACACCCAGG
AAAGGTCCTTCCTGGCATCAAGGGACAAAAGGCCACTGAATGCTGGTTGAAACAAACAAA
ACAAAACAAAATGAAACAAAAAAATCTGACTCTTAATCAGCAGTGCTTTTGGAGAAAGAT
CTTGATTAAAAGGGGGAAATGTGAAAATGAATAAAGGAAAACCTCACTAAAATGGAGTCA
GGAAGCCAGAAGGGGGAGTACTGTCAATATAGATTCCCAACAAGAAGAATCAATACAGAT
CTCTGGCAAGAAGTAACACTACTACTGCCAACAAGAGGAAGAAAGATTTTCTTCTAACAG
CCCCTCTGCCCTTCTCTTCTATAAAAGAGTTCCCTCTCTTTGTTTAATGTGACTTACAAG
TGGTTCACCAGTTGCATGTCCCAAATTGCAATTCTTTGCTGCTCCCAAATAAATGTGTTT
TGCTGGTAAAAAATCTGGCTGTTTTATTGCCTTAGGTTAACAGCTGCTTTTGTGGCCACG
TCTCAATAGAAAATGAGAAGTCTCTCCAGTGTCCCTACACGTGGGAGGAGAATATTCCCT
TTCCCACCAATAAGCAGACAAGACCATCTGCTAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-316, gnl|bosTau2|chr16 (21931254-21930957)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-316, gnl|bosTau2|chr16 (21931254-21930957)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               thg (0.126791)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)