Ss1.1-Pig4-TMW8059O22.3
               |  | GCCTGAGAGCGCAGAGCCTGAGGCAGAAGCAGATGGGGAGGAGCTGGACGGCAGCGACAT
GTCAGCCATCATCTATGAGATCCCCAAGGAGCCCGAGAAGAGGCGGCGGAGCAAACGGTC
GAGGGTAATGGATGCCGATGGCCTGCTTGAAATGTTCCACTGCCCCTACGAGGGTTGCAG
CCAGGTCTACGTGGCCCTCAGCAGCTTCCAGAACCACGTCAACCTTGTGCATCGGAAAGG
GAAGACCAAAGTGTGCCCTCACCCTGGCTGTGGCAAGAAGTTCTATTTATCCAACCACCT
GCGGCGGCACATGATCATCCACTCAGGTGTACGTGAATTCACCTGCGAAACCTGCGGCAA
GTCCTTCAAGAGGAAGAACCACCTGGAGGTACACCGGCGCACGCACACAGGCGAGACGCC
TCTGCAGTGCGAGATCTGTGGCTACCAGTGCAGACAGCGCGCGTCGCTCAACTGGCACAT
GAAGAAGCACACGGCCGAGGTGCAGTACAATTTCACGTGCGAGCGCTGCGGAAAGCGCTT
TGAGAAGCTGGACAGCGTCAAGTTCCACACACTCAAAAGCCACCCGGACCATAAGCCCGC
CTGATCCACCCAACCACTGACTGCCCTTATTTATTCGTCCGATCAGACTCTTAAGTCCGG
GCCTGCAGGGCCAGGACAGCCGCGGGGGCCGCCCGGATCGCAGGTCGGAAGGAGGCGCCC
CTGCCCTTCCCAAGGGCTGGGCCCCCGGGACAGGTACCCCCTATCCGCCCGATTTCTGGA
GCTGGCACCTGGGGCTGCACTGCTGGAACTGTTTTGAGTGCAGAGCGAGATTAAAGAGCG
AGAAAGAAGAAAAAAAAAAAAAAA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | GCCTGAGAGCGCAGAGCCTGAGGCAGAAGCAGATGGGGAGGAGCTGGACGGCAGCGACAT
GTCAGCCATCATCTATGAGATCCCCAAGGAGCCCGAGAAGAGGCGGCGGAGCAAACGGTC
GAGGGTAATGGATGCCGATGGCCTGCTTGAAATGTTCCACTGCCCCTACGAGGGTTGCAG
CCAGGTCTACGTGGCCCTCAGCAGCTTCCAGAACCACGTCAACCTTGTGCATCGGAAAGG
GAAGACCAAAGTGTGCCCTCACCCTGGCTGTGGCAAGAAGTTCTATTTATCCAACCACCT
GCGGCGGCACATGATCATCCACTCAGGTGTACGTGAATTCACCTGCGAAACCTGCGGCAA
GTCCTTCAAGAGGAAGAACCACCTGGAGGTACACCGGCGCACGCACACAGGCGAGACGCC
TCTGCAGTGCGAGATCTGTGGCTACCAGTGCAGACAGCGCGCGTCGCTCAACTGGCACAT
GAAGAAGCACACGGCCGAGGTGCAGTACAATTTCACGTGCGAGCGCTGCGGAAAGCGCTT
TGAGAAGCTGGACAGCGTCAAGTTCCACACACTCAAAAGCCACCCGGACCATAAGCCCGC
CTGATCCACCCAACCACTGACTGCCCTTATTTATTCGTCCGATCAGACTCTTAAGTCCGG
GCCTGCAGGGCCAGGACAGCCGCGGGGGCCGCCCGGATCGCAGGTCGGAAGGAGGCGCCC
CTGCCCTTCCCAAGGGCTGGGCCCCCGGGACAGGTACCCCCTATCCGCCCGATTTCTGGA
GCTGGCACCTGGGGCTGCACTGCTGGAACTGTTTTGAGTGCAGAGCGAGATTAAAGAGCG
AGAAAGAAGAAAAAAAAAAAAAAA | 
               |  | 100-211, gnl|bosTau2|chr7 (11343276-11343165) | 
               |  | 100-211, gnl|canFam2|chr20 (52882915-52882821) | 
               |  | 100-211, gnl|danRer3|chr20 (12418609-12418703) | 
               |  | 100-211, gnl|echTel1|scaffold_195378 (5655-5561) | 
               |  | 100-211, gnl|fr1|chrUn (139092566-139092658) | 
               |  | 100-211, gnl|hg17|chr19 (11458580-11458674) | 
               |  | 100-211, gnl|Hg17|chr19 (11458695-11458584) | 
               |  | 100-211, gnl|loxAfr1|scaffold_60150 (8291-8385) | 
               |  | 100-211, gnl|mm7|chr9 (21936405-21936499) | 
               |  | 100-211, gnl|Mm7|chr9 (21936520-21936409) | 
               |  | 100-211, gnl|panTro1|chr20 (11866187-11866281) | 
               |  | 100-211, gnl|rheMac2|chr19 (11308995-11309089) | 
               |  | 100-211, gnl|rn3|chr8 (21163737-21163831) | 
               |  | 100-211, gnl|tetNig1|chr3_random (114359-114452) | 
               |  | 100-211, gnl|xenTro1|scaffold_468 (789488-789397) | 
| 
 |  | 
               |  | 427-850, gnl|bosTau2|chr7 (11341688-11341261) | 
               |  | 427-850, gnl|Hg17|chr19 (11455674-11455242) | 
               |  | 427-850, gnl|Mm7|chr9 (21935015-21934590) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 100-211, gnl|bosTau2|chr7 (11343276-11343165) | 
               |  | 100-211, gnl|canFam2|chr20 (52882915-52882821) | 
               |  | 100-211, gnl|danRer3|chr20 (12418609-12418703) | 
               |  | 100-211, gnl|echTel1|scaffold_195378 (5655-5561) | 
               |  | 100-211, gnl|fr1|chrUn (139092566-139092658) | 
               |  | 100-211, gnl|hg17|chr19 (11458580-11458674) | 
               |  | 100-211, gnl|Hg17|chr19 (11458695-11458584) | 
               |  | 100-211, gnl|loxAfr1|scaffold_60150 (8291-8385) | 
               |  | 100-211, gnl|mm7|chr9 (21936405-21936499) | 
               |  | 100-211, gnl|Mm7|chr9 (21936520-21936409) | 
               |  | 100-211, gnl|panTro1|chr20 (11866187-11866281) | 
               |  | 100-211, gnl|rheMac2|chr19 (11308995-11309089) | 
               |  | 100-211, gnl|rn3|chr8 (21163737-21163831) | 
               |  | 100-211, gnl|tetNig1|chr3_random (114359-114452) | 
               |  | 100-211, gnl|xenTro1|scaffold_468 (789488-789397) | 
| 
 |  | 
               |  | 427-850, gnl|bosTau2|chr7 (11341688-11341261) | 
               |  | 427-850, gnl|Hg17|chr19 (11455674-11455242) | 
               |  | 427-850, gnl|Mm7|chr9 (21935015-21934590) | 
               |  | fce (0.271592) | 
               |  | eye (0.170503) | 
               |  | csp (0.161186) | 
               |  | jej (0.0989218) | 
               |  | fce (0.271592) | 
               |  | eye (0.170503) | 
               |  | csp (0.161186) | 
               |  | jej (0.0989218) |