Non-Coding RNA Search

Ss1.1-Pig4-TMW8059P21.3

Sequence:


               
               TTTTTTTTTTTTTTCCATAAAAATGTTCAAGTTGAGAGATGACTTGTTGCAAGTATACTC
ATCTACAGATAAAAGTCAGACCCCTATATTCTACCCAGAGCCATTCTTACTGTAGTCAGT
TCAAGCATGTTGCATTGGTTTCCCAGGAAAACGGGGTAGTTCCTGTGCTAGTTTATTGCA
CAGTTGACCCTTGAACAACACAGGTGTGAATTGCACTGGTTCACTTACATGCAGGGTTTT
TTTCAGTAGTAAATATTACAGTACTACATGATCCTCTATTAGTTGAATCTGCAGATAGGG
AGGAATCATGGATAATGAAGGGCCAGCTGTAAATTATGCACAGATCTTTGATTGCTTGGA
GAGTCAACACTCCTAACTCCTGCAATGTCAAGGGTCACCTGTAATTGTAACTATCAGATT
TTACTTTATTTATATAAAAAATGTATTTTATAAAAATCAGGTTTCAATATTACATCTTCT
TATATTGAATCTCTAAGTTTTACTTCTATAAAAAAATCTGTTTCACATTTCAACATAATG
TTGAAATTAATTACATCAAGGAAGCATAAATCATAACAGTTTAATCAAAGTGTTAAGAAA
GCCCTTTGGGAAAAGAAAGATTGAAGTTATTTTAAAATTTTAATTCAAAAGTAGTATAAA
TAAAAAATGCATATGGTTTTAGGATTTAATAATGTAGTTTAAAATAAGTGGACTAGAAGT
GGCTGTGTAGTTGGTGTTTGACATTGTAACATTTATATATGTTCTTATATATTTTTAGTT
TCAAAACTGTAAAAATGTATGGATCTTAAATAGAAAGTAATGAACTACTGTTGAATGTTC
TTTACAAAAGTAATTGATAACTAAATTTTTGATAGTTTAAAAATCAAATGATAATTTTCA
TTGATGTGTAGTGTATACATACATATTTTTCAAACTGACTCAGCCTCAATTGAATAAATG
AAAGTCAAAACAACAATGTTTTACATTATAGAAAAGTAGAATTTGAGATTCAGATATATT
ATTCTGTAAAATATATTAAAAAATTGCAAAACCAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTCCATAAAAATGTTCAAGTTGAGAGATGACTTGTTGCAAGTATACTC
ATCTACAGATAAAAGTCAGACCCCTATATTCTACCCAGAGCCATTCTTACTGTAGTCAGT
TCAAGCATGTTGCATTGGTTTCCCAGGAAAACGGGGTAGTTCCTGTGCTAGTTTATTGCA
CAGTTGACCCTTGAACAACACAGGTGTGAATTGCACTGGTTCACTTACATGCAGGGTTTT
TTTCAGTAGTAAATATTACAGTACTACATGATCCTCTATTAGTTGAATCTGCAGATAGGG
AGGAATCATGGATAATGAAGGGCCAGCTGTAAATTATGCACAGATCTTTGATTGCTTGGA
GAGTCAACACTCCTAACTCCTGCAATGTCAAGGGTCACCTGTAATTGTAACTATCAGATT
TTACTTTATTTATATAAAAAATGTATTTTATAAAAATCAGGTTTCAATATTACATCTTCT
TATATTGAATCTCTAAGTTTTACTTCTATAAAAAAATCTGTTTCACATTTCAACATAATG
TTGAAATTAATTACATCAAGGAAGCATAAATCATAACAGTTTAATCAAAGTGTTAAGAAA
GCCCTTTGGGAAAAGAAAGATTGAAGTTATTTTAAAATTTTAATTCAAAAGTAGTATAAA
TAAAAAATGCATATGGTTTTAGGATTTAATAATGTAGTTTAAAATAAGTGGACTAGAAGT
GGCTGTGTAGTTGGTGTTTGACATTGTAACATTTATATATGTTCTTATATATTTTTAGTT
TCAAAACTGTAAAAATGTATGGATCTTAAATAGAAAGTAATGAACTACTGTTGAATGTTC
TTTACAAAAGTAATTGATAACTAAATTTTTGATAGTTTAAAAATCAAATGATAATTTTCA
TTGATGTGTAGTGTATACATACATATTTTTCAAACTGACTCAGCCTCAATTGAATAAATG
AAAGTCAAAACAACAATGTTTTACATTATAGAAAAGTAGAATTTGAGATTCAGATATATT
ATTCTGTAAAATATATTAAAAAATTGCAAAACCAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-1054, gnl|bosTau2|chr4 (7818661-7817624)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1054, gnl|bosTau2|chr4 (7818661-7817624)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fco (0.314416)
               

               
               thg (0.253582)
               

               
               pla (0.133672)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               thg (0.253582)
               

               
               pla (0.133672)