Non-Coding RNA Search

Ss1.1-Pig4-TMW8060B01.5

Sequence:


               
               CTGTGTTTCATTTGAATTTTACACATTGTACCTCACTAGCTGTATAGAGCTTCATTATTT
TAAAAGTCACAATCTGTCTTGGATGTCATGTTTCACTTTTATATGTATTTGACTAATAAT
GTTTGAAAAAGATCATGATGTGTGTATTTAAAATTTAGGGATGAAAACTTTATGCATCTG
AGTGAAATTTAGTATAAATTAAATGTATATCCTATTTTAATAAATGTTAATTTGTTTATA
GGTAGTAGTTTAAATATGAATATGAAATTTGCTCAGTTTTCATTACATTAACAGGTAATC
AGAAAGATACTTGTCTAAGGGTTTGAGCCATAGTAAAATTAATATTTTTCATAGATTAAT
CGGATTATTTTATATAAATTAGGAAAATTAACTTCATAACAGATTTATTACATAGGTGAA
AATACATTTTGATGAATTATTTTGTAGTTTATTCATAACCGTAGGGATATTATAACTTTC
CAGAGATGTATGGAAAGGCATGGATGCAGGAATAGGAAAAAAACTAGTACCAGAAAAGCA
TAAATATTAATAACAAAACAAACCTCACATGAAGGTACACGAATAATTTATAAATAATTT
GTTAGTTTGAGTCATTATAAAAGTGAATTGGGTATCTTATTATTATTATTATTTTGTCTT
TTTTATTTGTTTATTTTTGTCTTTTTTAGGGCCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTGTTTCATTTGAATTTTACACATTGTACCTCACTAGCTGTATAGAGCTTCATTATTT
TAAAAGTCACAATCTGTCTTGGATGTCATGTTTCACTTTTATATGTATTTGACTAATAAT
GTTTGAAAAAGATCATGATGTGTGTATTTAAAATTTAGGGATGAAAACTTTATGCATCTG
AGTGAAATTTAGTATAAATTAAATGTATATCCTATTTTAATAAATGTTAATTTGTTTATA
GGTAGTAGTTTAAATATGAATATGAAATTTGCTCAGTTTTCATTACATTAACAGGTAATC
AGAAAGATACTTGTCTAAGGGTTTGAGCCATAGTAAAATTAATATTTTTCATAGATTAAT
CGGATTATTTTATATAAATTAGGAAAATTAACTTCATAACAGATTTATTACATAGGTGAA
AATACATTTTGATGAATTATTTTGTAGTTTATTCATAACCGTAGGGATATTATAACTTTC
CAGAGATGTATGGAAAGGCATGGATGCAGGAATAGGAAAAAAACTAGTACCAGAAAAGCA
TAAATATTAATAACAAAACAAACCTCACATGAAGGTACACGAATAATTTATAAATAATTT
GTTAGTTTGAGTCATTATAAAAGTGAATTGGGTATCTTATTATTATTATTATTTTGTCTT
TTTTATTTGTTTATTTTTGTCTTTTTTAGGGCCACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-677, gnl|bosTau2|chr24 (31088437-31087740)
               

               
               1-677, gnl|Hg17|chr18 (12663337-12662690)
               

               
               1-677, gnl|Mm7|chr18 (68011503-68010807)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-677, gnl|bosTau2|chr24 (31088437-31087740)
               

               
               1-677, gnl|Hg17|chr18 (12663337-12662690)
               

               
               1-677, gnl|Mm7|chr18 (68011503-68010807)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	1-677, gnl\|bosTau2\|chr24 (31088437-31087740)
	1-677, gnl\|Hg17\|chr18 (12663337-12662690)
	1-677, gnl\|Mm7\|chr18 (68011503-68010807)