Non-Coding RNA Search

Ss1.1-Pig4-TMW8060D19.3

Sequence:


               
               GGAGGACGAGGAGGCGCTGCTTGAGGACGAGGACGAAGAGCCACCCCCTGCCCAGGCCTC
GGACGAGGCCGCGCAGCCGCCGCCGGAGCCCCCGGAGGCCGCAGCCACAGAGGCGGTGGC
CGAGTCCGATGCTTCCGAGAAACCAGCGGAGGAGGCCACGGCCGGGTCAGGTGGGGTAAA
TGGTGGCGAAGAGCAGGGCACCGTCAAGGGGGAGGAAGAGGAACCGGAGGAGCGGAGCGG
GGACGAGACGCCGGGATCCGAGGCGCCGGCTGACAAGGCCGCGGAGGGGAGGGAAGCCTG
GAGACAAAGGAAAACAAAAACACAATGATTCAAAATCTGTGGGATGCAGCAAAAGCAGTT
CTAAAAGGGCAGTTTATACAGATATAAGCCTGCCTTGGGAAACAGGAAAAAATCTCAAAC
AACCTGGCCTTACAAGAAACTAGAAAAAGAAGAAGAAACATAACCCAAAGTTAGTAGAAG
GAAAGAAATAAAGGTCAGAGCAGAAATAAATGAAATAGACTCTAAAACAACAATAAAAGC
AATTCAGTGAAACTTATAGCTGGTTCTTTGAAAAGATAAACAAAATTGATATACCTTTAG
CCTTGATAAAGCTTTAGCCAGACTCATCAAGAAAAAGCAAGAATCCAAATCAATAAAATT
AGAAATGAAGAAGTTACAACTGATATCGCAGAAATACAAAGGGTCATAAGAGACTACTGC
AGACAACACTGTATGTCAATAAAATGGACAACCTTGAAGAATGTACAAATTCCCTATAAT
CTACCAAAACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGACGAGGAGGCGCTGCTTGAGGACGAGGACGAAGAGCCACCCCCTGCCCAGGCCTC
GGACGAGGCCGCGCAGCCGCCGCCGGAGCCCCCGGAGGCCGCAGCCACAGAGGCGGTGGC
CGAGTCCGATGCTTCCGAGAAACCAGCGGAGGAGGCCACGGCCGGGTCAGGTGGGGTAAA
TGGTGGCGAAGAGCAGGGCACCGTCAAGGGGGAGGAAGAGGAACCGGAGGAGCGGAGCGG
GGACGAGACGCCGGGATCCGAGGCGCCGGCTGACAAGGCCGCGGAGGGGAGGGAAGCCTG
GAGACAAAGGAAAACAAAAACACAATGATTCAAAATCTGTGGGATGCAGCAAAAGCAGTT
CTAAAAGGGCAGTTTATACAGATATAAGCCTGCCTTGGGAAACAGGAAAAAATCTCAAAC
AACCTGGCCTTACAAGAAACTAGAAAAAGAAGAAGAAACATAACCCAAAGTTAGTAGAAG
GAAAGAAATAAAGGTCAGAGCAGAAATAAATGAAATAGACTCTAAAACAACAATAAAAGC
AATTCAGTGAAACTTATAGCTGGTTCTTTGAAAAGATAAACAAAATTGATATACCTTTAG
CCTTGATAAAGCTTTAGCCAGACTCATCAAGAAAAAGCAAGAATCCAAATCAATAAAATT
AGAAATGAAGAAGTTACAACTGATATCGCAGAAATACAAAGGGTCATAAGAGACTACTGC
AGACAACACTGTATGTCAATAAAATGGACAACCTTGAAGAATGTACAAATTCCCTATAAT
CTACCAAAACTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               284-602, gnl|bosTau2|chr10 (64146106-64146428)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               284-602, gnl|bosTau2|chr10 (64146106-64146428)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               isp (0.150376)
               

               
               bfe (0.149858)
               

               
               spl (0.143184)
               

               
               bla (0.124347)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.150376)
               

               
               bfe (0.149858)
               

               
               spl (0.143184)
               

               
               bla (0.124347)