Ss1.1-Pig4-TMW8060F19.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCTACTCCACTCGGGGGAATAGGATGGAGCCCACTCCTTCCTCTAGAACCGTAGGGCT TGCTCCCCCTCCCCTTGTGCCGCTGAGGAACGAGCTGCTCGGTACCCTTCGTGCGCCCGT CAGGGGCCCTCTGACAGGGGCTGCCTCAGCCCGGGGCCCCTGCAAGGTGGGCCTTGCAGC CCACAGCCTGCTTCCCAGATGCACACTCCACGGCCAAGGGGAGCCGCCCTCATCACACCA GGTGGGCACCTCCAGCTTTCCTCTTGGTGGGTTTTTGTTTTTTATGGGTTGAACATTTGT TAATACTTTTTACTTTTGTATATTTTCACTACAGTTTATTTTTTTATAGGCTATTTTTAT CAAAGTTTTCTAGATTATGTACGTCTATTTTATATAACAAATTCTTCTGTGTGCACGACT CCCTCATATGTATTTATGTAAACCTGAGCCTCTGGAATGCGCTTCACCTCTGTGCAGTCT CTGGCCTCTAGCTGGACCGTCACTGACGTCCCCTTTTGTGTGTGGGGGCCCACTTCGTAC CCCAGGTAGCCGTGGGCTACTTGCAGTCATGCTGACAGCGGTCCGGCAGCAGCCAAGACT GTTGATTGCTGGGAACAATCCTGGTTTCAACTACATTATATCGATATAGGAAGTATTCCA GGCAAATAGCCAGTCTGGGTTTAACTAAATGTTTGTATTATTGCACAAATCCCTCCTCGC TTTGCACAGTGCTGCCTTCCTGCTTGCGTGCTGGGCAGCTGGGTCTGCCTGGGGCTGTCC TCGCAGGCAGGAGGCTGGGTGCGGCACTGGAGGCCTCGGGGCATTGCCAAGTGACCCTTT CCTTCTTGTCACAGCAGCTTCTGTGCTTACCTTCAGGTTAAATTTTGGAATTGTCATACT AAAAGGCAAAATAAACTACTAATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCTACTCCACTCGGGGGAATAGGATGGAGCCCACTCCTTCCTCTAGAACCGTAGGGCT TGCTCCCCCTCCCCTTGTGCCGCTGAGGAACGAGCTGCTCGGTACCCTTCGTGCGCCCGT CAGGGGCCCTCTGACAGGGGCTGCCTCAGCCCGGGGCCCCTGCAAGGTGGGCCTTGCAGC CCACAGCCTGCTTCCCAGATGCACACTCCACGGCCAAGGGGAGCCGCCCTCATCACACCA GGTGGGCACCTCCAGCTTTCCTCTTGGTGGGTTTTTGTTTTTTATGGGTTGAACATTTGT TAATACTTTTTACTTTTGTATATTTTCACTACAGTTTATTTTTTTATAGGCTATTTTTAT CAAAGTTTTCTAGATTATGTACGTCTATTTTATATAACAAATTCTTCTGTGTGCACGACT CCCTCATATGTATTTATGTAAACCTGAGCCTCTGGAATGCGCTTCACCTCTGTGCAGTCT CTGGCCTCTAGCTGGACCGTCACTGACGTCCCCTTTTGTGTGTGGGGGCCCACTTCGTAC CCCAGGTAGCCGTGGGCTACTTGCAGTCATGCTGACAGCGGTCCGGCAGCAGCCAAGACT GTTGATTGCTGGGAACAATCCTGGTTTCAACTACATTATATCGATATAGGAAGTATTCCA GGCAAATAGCCAGTCTGGGTTTAACTAAATGTTTGTATTATTGCACAAATCCCTCCTCGC TTTGCACAGTGCTGCCTTCCTGCTTGCGTGCTGGGCAGCTGGGTCTGCCTGGGGCTGTCC TCGCAGGCAGGAGGCTGGGTGCGGCACTGGAGGCCTCGGGGCATTGCCAAGTGACCCTTT CCTTCTTGTCACAGCAGCTTCTGTGCTTACCTTCAGGTTAAATTTTGGAATTGTCATACT AAAAGGCAAAATAAACTACTAATT |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 169-762, gnl|bosTau2|chr21 (1023223-1022651) | |
| 169-762, gnl|Hg17|chr15 (76075188-76074564) | |
| 790-918, gnl|bosTau2|chr21 (1022659-1022530) | |
| 790-918, gnl|canFam2|chr3 (61089635-61089414) | |
| 790-918, gnl|canFam2|chr3 (61089279-61089854) | |
| 790-918, gnl|echTel1|scaffold_184977 (11158-11400) | |
| 790-918, gnl|echTel1|scaffold_184977 (11518-10957) | |
| 790-918, gnl|hg17|chr15 (76835635-76835924) | |
| 790-918, gnl|hg17|chr15 (76074196-76074896) | |
| 790-918, gnl|Hg17|chr15 (76074610-76074397) | |
| 790-918, gnl|loxAfr1|scaffold_38130 (17193-16935) | |
| 790-918, gnl|loxAfr1|scaffold_38130 (16811-17413) | |
| 790-918, gnl|mm7|chr9 (89831041-89830779) | |
| 790-918, gnl|mm7|chr9 (89830626-89831260) | |
| 790-918, gnl|Mm7|chr9 (89830952-89830799) | |
| 790-918, gnl|monDom2|scaffold_41 (16359700-16359292) | |
| 790-918, gnl|monDom2|scaffold_41 (16359122-16359952) | |
| 790-918, gnl|panTro1|chr16 (77534806-77535095) | |
| 790-918, gnl|panTro1|chr16 (76727509-76728171) | |
| 790-918, gnl|rheMac2|chr7 (57876611-57876894) | |
| 790-918, gnl|rheMac2|chr7 (57028866-57029559) | |
| 790-918, gnl|rn3|chr8 (95129893-95129629) | |
| 790-918, gnl|rn3|chr8 (95129471-95130084) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 169-762, gnl|bosTau2|chr21 (1023223-1022651) | |
| 169-762, gnl|Hg17|chr15 (76075188-76074564) | |
| 790-918, gnl|bosTau2|chr21 (1022659-1022530) | |
| 790-918, gnl|canFam2|chr3 (61089635-61089414) | |
| 790-918, gnl|canFam2|chr3 (61089279-61089854) | |
| 790-918, gnl|echTel1|scaffold_184977 (11158-11400) | |
| 790-918, gnl|echTel1|scaffold_184977 (11518-10957) | |
| 790-918, gnl|hg17|chr15 (76835635-76835924) | |
| 790-918, gnl|hg17|chr15 (76074196-76074896) | |
| 790-918, gnl|Hg17|chr15 (76074610-76074397) | |
| 790-918, gnl|loxAfr1|scaffold_38130 (17193-16935) | |
| 790-918, gnl|loxAfr1|scaffold_38130 (16811-17413) | |
| 790-918, gnl|mm7|chr9 (89831041-89830779) | |
| 790-918, gnl|mm7|chr9 (89830626-89831260) | |
| 790-918, gnl|Mm7|chr9 (89830952-89830799) | |
| 790-918, gnl|monDom2|scaffold_41 (16359700-16359292) | |
| 790-918, gnl|monDom2|scaffold_41 (16359122-16359952) | |
| 790-918, gnl|panTro1|chr16 (77534806-77535095) | |
| 790-918, gnl|panTro1|chr16 (76727509-76728171) | |
| 790-918, gnl|rheMac2|chr7 (57876611-57876894) | |
| 790-918, gnl|rheMac2|chr7 (57028866-57029559) | |
| 790-918, gnl|rn3|chr8 (95129893-95129629) | |
| 790-918, gnl|rn3|chr8 (95129471-95130084) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| fbs (0.175346) | |
| cly (0.120642) |