Non-Coding RNA Search

Ss1.1-Pig4-TMW8060J06.3

Sequence:


               
               CCGCGGCCAGGGCTGTGAAAAGGAACAGCCTTCTTCCTACTGTAGCAACCACTAATTCTC
CCTGGGCCCACCTAGGTAGGGGCACGTGGGAATCTCTGCGCGCTCTTGCCCTCGAGTTTG
CTCCTTGTCCAGCCCTGATTCTTGGAACGACCTGATCTCGCACGTCACCAGCCACTTGGG
GAAACCCCACAAATGGGCTGTTGCACTTTTCTTGAAAGTTTACACCAAAGGGGGTTGGGG
TTTTGCCCTTTGCAGAGTTGGGACACAAAGTAACTTGGAGTCGCCTGGATTCTGGGAACA
AAAGTGGAGTGGCCCGTTTCAGATGCTTCAGGAACATCTGTTTGCATTTTGAAATCTGAG
CCATAATTTTTACCGAAACTTTTGGAGAAATGGCTGCCCTCCTAGAGGAAAAAACGAACT
AATTCCAGTGTAGTCTTTATAACATTACAAATTCTTTCCAGTTTAAAGAACTTTTCCCCC
ACAACTGAAACAAAATGGGGGAGTATTTCACTACTGGTGCATTGTTACTAGGGAACCTCT
ATTTTGAAATTCCAAGTAATTGTAAGTCACTTCTGTGGATCCCAGATGGCTACCAAAATA
GAAATTGCAGTTTTGAGCTACTTCATATATGGCGTTCGGCGGGTAGAGGAAACCTGCTTT
GAAAAAAATAAACACTGAACCTTATATTACAGCTGTAGCAGCTTTTTAAGGATTAAAGTT
TGATCTGTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCGGCCAGGGCTGTGAAAAGGAACAGCCTTCTTCCTACTGTAGCAACCACTAATTCTC
CCTGGGCCCACCTAGGTAGGGGCACGTGGGAATCTCTGCGCGCTCTTGCCCTCGAGTTTG
CTCCTTGTCCAGCCCTGATTCTTGGAACGACCTGATCTCGCACGTCACCAGCCACTTGGG
GAAACCCCACAAATGGGCTGTTGCACTTTTCTTGAAAGTTTACACCAAAGGGGGTTGGGG
TTTTGCCCTTTGCAGAGTTGGGACACAAAGTAACTTGGAGTCGCCTGGATTCTGGGAACA
AAAGTGGAGTGGCCCGTTTCAGATGCTTCAGGAACATCTGTTTGCATTTTGAAATCTGAG
CCATAATTTTTACCGAAACTTTTGGAGAAATGGCTGCCCTCCTAGAGGAAAAAACGAACT
AATTCCAGTGTAGTCTTTATAACATTACAAATTCTTTCCAGTTTAAAGAACTTTTCCCCC
ACAACTGAAACAAAATGGGGGAGTATTTCACTACTGGTGCATTGTTACTAGGGAACCTCT
ATTTTGAAATTCCAAGTAATTGTAAGTCACTTCTGTGGATCCCAGATGGCTACCAAAATA
GAAATTGCAGTTTTGAGCTACTTCATATATGGCGTTCGGCGGGTAGAGGAAACCTGCTTT
GAAAAAAATAAACACTGAACCTTATATTACAGCTGTAGCAGCTTTTTAAGGATTAAAGTT
TGATCTGTAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-730, gnl|bosTau2|chr19 (37192822-37193548)
               

               
               1-730, gnl|Hg17|chr17 (40594070-40593309)
               

               
               1-730, gnl|Mm7|chr11 (103241313-103240623)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-730, gnl|bosTau2|chr19 (37192822-37193548)
               

               
               1-730, gnl|Hg17|chr17 (40594070-40593309)
               

               
               1-730, gnl|Mm7|chr11 (103241313-103240623)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	1-730, gnl\|bosTau2\|chr19 (37192822-37193548)
	1-730, gnl\|Hg17\|chr17 (40594070-40593309)
	1-730, gnl\|Mm7\|chr11 (103241313-103240623)