Ss1.1-Pig4-TMW8060K21.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTGTTCGGTCAAGTGTGGCAAAGGCGTCCGTCATCGGACCGTGAGGTGTACCAACCCTC GAAAGAAATGCGTCCTTTCCACCAGACCGCGGGAGGCTGAGGATTGTGAAGATTATTCCA AGTGCTATGTGTGGCGAATGGGTGACTGGTCTAAGTGCTCAATTACCTGTGGCAAGGGAA TGCAGTCTCGGGTCATTCAGTGCATGCATAAGATCACAGGAAGACATGGAAATGAATGTT TTTCTTCAGAAAAACCTGCAGCATACAGGCCATGCCACCTGCAGCCCTGCAATGAGAAGA TTAATGTCAATACCATAACATCACCCAGGCTAGCTGCTTTGACTTTCAAGTGCCTGGGAG ACCAGTGGCCTGTGTACTGCCGGGTGATACGTGAAAAGAACCTCTGTCAGGATATGCGGT GGTATCAGCGCTGCTGTGAGACGTGCAGGGACTTCTATGCCCAGAAGCTGCAGCAGAAGA GTTGACCTCTAGCACGCTGGCTGGCTCACAGCCCTTTGCCATTGCATTTATTTATGAACA CACACCCTAGCATGTTTTTCAGACCAAATATTATCAGATTACATATAATTTAATCAAATT AATTTATTTTGGGGGCCTGCCACACATCCGATATGGTGTTTGTTTTGGTTCTGCAAACAA ATTTTGATGTATGCTGTATGGCTTCATACATCATTTTACATCAATAAGTTGGATCCAGTT TCCAGAATGAAAATAAAAAGGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTGTTCGGTCAAGTGTGGCAAAGGCGTCCGTCATCGGACCGTGAGGTGTACCAACCCTC GAAAGAAATGCGTCCTTTCCACCAGACCGCGGGAGGCTGAGGATTGTGAAGATTATTCCA AGTGCTATGTGTGGCGAATGGGTGACTGGTCTAAGTGCTCAATTACCTGTGGCAAGGGAA TGCAGTCTCGGGTCATTCAGTGCATGCATAAGATCACAGGAAGACATGGAAATGAATGTT TTTCTTCAGAAAAACCTGCAGCATACAGGCCATGCCACCTGCAGCCCTGCAATGAGAAGA TTAATGTCAATACCATAACATCACCCAGGCTAGCTGCTTTGACTTTCAAGTGCCTGGGAG ACCAGTGGCCTGTGTACTGCCGGGTGATACGTGAAAAGAACCTCTGTCAGGATATGCGGT GGTATCAGCGCTGCTGTGAGACGTGCAGGGACTTCTATGCCCAGAAGCTGCAGCAGAAGA GTTGACCTCTAGCACGCTGGCTGGCTCACAGCCCTTTGCCATTGCATTTATTTATGAACA CACACCCTAGCATGTTTTTCAGACCAAATATTATCAGATTACATATAATTTAATCAAATT AATTTATTTTGGGGGCCTGCCACACATCCGATATGGTGTTTGTTTTGGTTCTGCAAACAA ATTTTGATGTATGCTGTATGGCTTCATACATCATTTTACATCAATAAGTTGGATCCAGTT TCCAGAATGAAAATAAAAAGGGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 1-155, gnl|bosTau2|chr7 (19303697-19303851) | |
| 1-155, gnl|canFam2|chr11 (21484103-21484307) | |
| 1-155, gnl|danRer3|chr5 (50867362-50867172) | |
| 1-155, gnl|dasNov1|scaffold_8009 (52484-52281) | |
| 1-155, gnl|echTel1|scaffold_319409 (14327-14132) | |
| 1-155, gnl|galGal2|chr10_random (1140167-1139959) | |
| 1-155, gnl|hg17|chr5 (129067805-129068009) | |
| 1-155, gnl|Hg17|chr5 (129067829-129067983) | |
| 1-155, gnl|loxAfr1|scaffold_33314 (86-290) | |
| 1-155, gnl|mm7|chr18 (59422202-59422398) | |
| 1-155, gnl|Mm7|chr18 (59422226-59422380) | |
| 1-155, gnl|oryCun1|scaffold_214884 (172574-172778) | |
| 1-155, gnl|panTro1|chr4 (135424778-135424982) | |
| 1-155, gnl|rheMac2|chr6 (126070890-126071094) | |
| 1-155, gnl|rn3|chr18 (54900494-54900690) | |
| 1-155, gnl|xenTro1|scaffold_2 (2483961-2483797) | |
| 331-476, gnl|bosTau2|chr21 (4827218-4827073) | |
| 331-476, gnl|canFam2|chr3 (43794075-43793983) | |
| 331-476, gnl|danRer3|chr5 (50828015-50828105) | |
| 331-476, gnl|dasNov1|scaffold_41969 (6334-6242) | |
| 331-476, gnl|echTel1|scaffold_236268 (477-385) | |
| 331-476, gnl|galGal2|chr10 (17833074-17832982) | |
| 331-476, gnl|hg17|chr15 (98332149-98332241) | |
| 331-476, gnl|Hg17|chr15 (98332293-98332148) | |
| 331-476, gnl|loxAfr1|scaffold_6417 (60217-60125) | |
| 331-476, gnl|mm7|chr7 (63008010-63007918) | |
| 331-476, gnl|Mm7|chr7 (63007864-63008009) | |
| 331-476, gnl|monDom2|scaffold_12 (60856567-60856475) | |
| 331-476, gnl|oryCun1|scaffold_52334 (97-4) | |
| 331-476, gnl|panTro1|chr16 (99441337-99441429) | |
| 331-476, gnl|rheMac2|chr7 (80141470-80141562) | |
| 331-476, gnl|rn3|chr18 (54919274-54919182) | |
| 331-476, gnl|xenTro1|scaffold_208 (1473160-1473072) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-155, gnl|bosTau2|chr7 (19303697-19303851) | |
| 1-155, gnl|canFam2|chr11 (21484103-21484307) | |
| 1-155, gnl|danRer3|chr5 (50867362-50867172) | |
| 1-155, gnl|dasNov1|scaffold_8009 (52484-52281) | |
| 1-155, gnl|echTel1|scaffold_319409 (14327-14132) | |
| 1-155, gnl|galGal2|chr10_random (1140167-1139959) | |
| 1-155, gnl|hg17|chr5 (129067805-129068009) | |
| 1-155, gnl|Hg17|chr5 (129067829-129067983) | |
| 1-155, gnl|loxAfr1|scaffold_33314 (86-290) | |
| 1-155, gnl|mm7|chr18 (59422202-59422398) | |
| 1-155, gnl|Mm7|chr18 (59422226-59422380) | |
| 1-155, gnl|oryCun1|scaffold_214884 (172574-172778) | |
| 1-155, gnl|panTro1|chr4 (135424778-135424982) | |
| 1-155, gnl|rheMac2|chr6 (126070890-126071094) | |
| 1-155, gnl|rn3|chr18 (54900494-54900690) | |
| 1-155, gnl|xenTro1|scaffold_2 (2483961-2483797) | |
| 331-476, gnl|bosTau2|chr21 (4827218-4827073) | |
| 331-476, gnl|canFam2|chr3 (43794075-43793983) | |
| 331-476, gnl|danRer3|chr5 (50828015-50828105) | |
| 331-476, gnl|dasNov1|scaffold_41969 (6334-6242) | |
| 331-476, gnl|echTel1|scaffold_236268 (477-385) | |
| 331-476, gnl|galGal2|chr10 (17833074-17832982) | |
| 331-476, gnl|hg17|chr15 (98332149-98332241) | |
| 331-476, gnl|Hg17|chr15 (98332293-98332148) | |
| 331-476, gnl|loxAfr1|scaffold_6417 (60217-60125) | |
| 331-476, gnl|mm7|chr7 (63008010-63007918) | |
| 331-476, gnl|Mm7|chr7 (63007864-63008009) | |
| 331-476, gnl|monDom2|scaffold_12 (60856567-60856475) | |
| 331-476, gnl|oryCun1|scaffold_52334 (97-4) | |
| 331-476, gnl|panTro1|chr16 (99441337-99441429) | |
| 331-476, gnl|rheMac2|chr7 (80141470-80141562) | |
| 331-476, gnl|rn3|chr18 (54919274-54919182) | |
| 331-476, gnl|xenTro1|scaffold_208 (1473160-1473072) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |