Ss1.1-Pig4-TMW8060L03.3
|
AAAAACCCGATGGCCTTATCAATGAAGCTTCTAGGCAAGTTGCTTTGGCAGATATCATCA
TCATCAATAAAACAGACTTGGTTTCAGAAGAGGATTTGAACAAATTAAGAACAACTATTA
GATCAATAAATGGACTGGGAAAAATTTTGGAAACACAAAGATCAAGAGTTGATCTCTCAA
ATGTATTAGATCTTCATGCCTTTGACAGTCTCTCTGGAATAAGTTTGCAGAAAAAACTTC
AGCATATGTCAACAACACAACCTCACGCTGATCAGAGTATTGTTACAGTCACATTTGAAG
TACCAGGAAATGCAAAGGAAGAAAGTCTCAATGTATATATTCAGAATCTTATCTGGGAAA
AGAATGTGAGCAACAGAGATGGCAACTGCATGGAGGTCATACGGCTAAAGGGGCTGATAT
CAATCAGAGACAAACCACAACAAGTGATTGTCCAAGGTGTCCATGAGCTGTATGATCTTG
AGGAGACCCCAGTGAGCTGGAAGGACGACACTGAGAGAACAAATCGGTTGATTCTTATTG
GCAGGAATTTAGATAAGGATATCCTTAAACAACTGTTTATAGCAACTGTGACTGAAACAG
AAAAGCGGTGGACAAAACATATCAAAGAAGATCAAGTTTGTCCGTAACACTAGAAGCATC
AAAATGGTTGGGCGATAAAATTGGAAATAAGTTTCCTATTAGATGTATTTCAAGCATCCG
TTCTTTGCACTACTTCTTTTATGAATTCCAGTGTACTTTCAAATACTATTTATTTTATAG
AATACATAAAATAGAGTAAATCAGTATTGTGAAACACTTGACATTCATACAATAAAATAC
AGTTGTATCCTCTAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAACCCGATGGCCTTATCAATGAAGCTTCTAGGCAAGTTGCTTTGGCAGATATCATCA
TCATCAATAAAACAGACTTGGTTTCAGAAGAGGATTTGAACAAATTAAGAACAACTATTA
GATCAATAAATGGACTGGGAAAAATTTTGGAAACACAAAGATCAAGAGTTGATCTCTCAA
ATGTATTAGATCTTCATGCCTTTGACAGTCTCTCTGGAATAAGTTTGCAGAAAAAACTTC
AGCATATGTCAACAACACAACCTCACGCTGATCAGAGTATTGTTACAGTCACATTTGAAG
TACCAGGAAATGCAAAGGAAGAAAGTCTCAATGTATATATTCAGAATCTTATCTGGGAAA
AGAATGTGAGCAACAGAGATGGCAACTGCATGGAGGTCATACGGCTAAAGGGGCTGATAT
CAATCAGAGACAAACCACAACAAGTGATTGTCCAAGGTGTCCATGAGCTGTATGATCTTG
AGGAGACCCCAGTGAGCTGGAAGGACGACACTGAGAGAACAAATCGGTTGATTCTTATTG
GCAGGAATTTAGATAAGGATATCCTTAAACAACTGTTTATAGCAACTGTGACTGAAACAG
AAAAGCGGTGGACAAAACATATCAAAGAAGATCAAGTTTGTCCGTAACACTAGAAGCATC
AAAATGGTTGGGCGATAAAATTGGAAATAAGTTTCCTATTAGATGTATTTCAAGCATCCG
TTCTTTGCACTACTTCTTTTATGAATTCCAGTGTACTTTCAAATACTATTTATTTTATAG
AATACATAAAATAGAGTAAATCAGTATTGTGAAACACTTGACATTCATACAATAAAATAC
AGTTGTATCCTCTAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|34530772|dbj|BAC85973.1| |
Protein identifier
|
gi|34530772|dbj|BAC85973.1| |
|
32-134, gnl|bosTau2|chr8 (21743006-21742904) |
|
32-134, gnl|canFam2|chr1 (92156012-92155901) |
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32-134, gnl|dasNov1|scaffold_544 (6979-7090) |
|
32-134, gnl|echTel1|scaffold_261991 (6095-5985) |
|
32-134, gnl|galGal2|chrZ_random (14178-14057) |
|
32-134, gnl|hg17|chr2 (113936195-113936307) |
|
32-134, gnl|Hg17|chr9 (144798-144696) |
|
32-134, gnl|loxAfr1|scaffold_6341 (84787-84899) |
|
32-134, gnl|mm7|chr19 (24640845-24640734) |
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32-134, gnl|Mm7|chr19 (24640827-24640518) |
|
32-134, gnl|monDom2|scaffold_17 (21988062-21987952) |
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32-134, gnl|oryCun1|scaffold_185844 (1643-1528) |
|
32-134, gnl|panTro1|chr12 (116987893-116988007) |
|
32-134, gnl|rheMac2|chr15 (77049780-77049894) |
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32-134, gnl|rn3|chr1 (228545009-228544899) |
|
32-134, gnl|tetNig1|chr12 (8451488-8451387) |
|
32-134, gnl|xenTro1|scaffold_535 (119344-119457) |
| |
|
535-838, gnl|bosTau2|chr8 (21720938-21720630) |
|
535-838, gnl|Hg17|chr9 (111579-111281) |
|
535-838, gnl|Mm7|chr19 (24620697-24620415) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
32-134, gnl|bosTau2|chr8 (21743006-21742904) |
|
32-134, gnl|canFam2|chr1 (92156012-92155901) |
|
32-134, gnl|dasNov1|scaffold_544 (6979-7090) |
|
32-134, gnl|echTel1|scaffold_261991 (6095-5985) |
|
32-134, gnl|galGal2|chrZ_random (14178-14057) |
|
32-134, gnl|hg17|chr2 (113936195-113936307) |
|
32-134, gnl|Hg17|chr9 (144798-144696) |
|
32-134, gnl|loxAfr1|scaffold_6341 (84787-84899) |
|
32-134, gnl|mm7|chr19 (24640845-24640734) |
|
32-134, gnl|Mm7|chr19 (24640827-24640518) |
|
32-134, gnl|monDom2|scaffold_17 (21988062-21987952) |
|
32-134, gnl|oryCun1|scaffold_185844 (1643-1528) |
|
32-134, gnl|panTro1|chr12 (116987893-116988007) |
|
32-134, gnl|rheMac2|chr15 (77049780-77049894) |
|
32-134, gnl|rn3|chr1 (228545009-228544899) |
|
32-134, gnl|tetNig1|chr12 (8451488-8451387) |
|
32-134, gnl|xenTro1|scaffold_535 (119344-119457) |
| |
|
535-838, gnl|bosTau2|chr8 (21720938-21720630) |
|
535-838, gnl|Hg17|chr9 (111579-111281) |
|
535-838, gnl|Mm7|chr19 (24620697-24620415) |
|
gul (0.177588) |
|
rec (0.17307) |
|
fhi (0.169578) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
bfe (0.149858) |
|
lin (0.145603) |
|
tra (0.123092) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ldo (0.0970026) |
|
gul (0.177588) |
|
rec (0.17307) |
|
fhi (0.169578) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
bfe (0.149858) |
|
lin (0.145603) |
|
tra (0.123092) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ldo (0.0970026) |
