Ss1.1-Pig4-TMW8060L04.5
|
GCGCGGAGGAGAGCGGTTGCTTCCCTCCGACCGGCTGGAGGCTGCTGGAGGCGGGGCCGT
TACCCGCCGGCAGCTCGGAGCGAGCCGGGCGGCCAGAAAGCCGGCGCGCCCGAGCGCCAT
GATTCCTCTGGAGAAGCCGGGCAGCGGCGACTCCTCCCCGGCCGCCGCCTCCGGCTCGGG
CCGGGCCAGCCGGGGACCGAGCACGCCGCGCCGGCCGCCGCCGCCGGCCCGCGGGCTGCT
GACGGAGATCCGCACCGCCGTGCGCACCGAGCCCTTCCAGGACAGCTACAGCCTGAGCCC
GGGCCGGGAGCTGGGCAGGGGGAAATTTGCAGTGGTGAGGAAATGTATAAAGAAAGACTC
TGGAAGAGAATTTGCAGCAAAGTTCATGAGAAAAAGGAGAAAAGGCCAAGATTGTCGGAT
GGAAATAATTCACGAAATTGCTGTACTTGAACTAGCACAGGACAATCCTTGGGTCATTAA
CTTGCATGAAGTCTATGAAACGCCGTCGGAGATGATCTTAGTTCTGGAATATGCCGCTGG
GGGCGAGATCTTTGACCAGTGTGTGGCAGACAGAGAAGAAGCCTTTACGGAAAAAGATGT
TCAGAGACTCATGAGGCAGATCTTAGAAGGTGTCCGCTTTTTACACGCTCACGATGTGGT
GCATCTTGATCTGAAGCCTCAGAATATTCTGCTGACAAGTGAATCTCCGTTGGGTGACAT
TAAGATAGTCGACTTCGGACTTTCGAGAATCATGAAGAAGAGCGAGGAGCTGCGGGAGAT
TATGGGCACCCCTGAGTACGTGGCTCCTGAAATTCTTAGTTATGATCCTATCAGCATGGC
AACGGACATGTGGAGCATCGGAGTGCTGACGTACGTCATGCTGACGGGAGTGTCGCCTTT
CCTGGGCGACAGTAAACAAGAAACGTTCCTCAACATCTCGCGGATGAACTTAAATTATTC
TGAGGAGGAATTCGATGTTGTGTCCGAGTCGGCTGTTGACTTCATCAAGGCGCTTTTAGT
TAAGGAACCTGAAGATCGCGCCACTGCTGAAGAGTGTCTGAAACACCCATGGCTGGCACA
GGGCAGTGCCCAGGAACCGTCCTGCAAGCTGAAAGGGGCGCCCGAGGAAGCCCAGGCCCT
CCAGGAAGGCGATTCTGTGCCTGAAAGTAACTCAGACCCTCAGACACCCGAAACCCAGGA
GCCAGTCGTAACAGAGGAGTTAATTGTAGTTACTTCCTACACTTTAGGACAATGCAGACA
GTCGGAAAAAGAGAAAATGGAGCAAAAGGCCATTTCCAAACGATTTAAATTTGAGGAACC
TTTGCTACAGGAAATTCCAGGCGATTTTATCTACTGAGCAGCATCTCCCTCTAGGACTTG
AAAATTTCTACTTTGGGACCATTATTTATGAACTTCTGGCCAAATGGTACAGGTACTGAA
AGTGGATGACCAGGTGTCACTGATAGAACCTGAAATGACTGTCAGACTTGTGGAGTCAGA
GAAATCAAGCCAGATCTAGTCAAGTTGCCAACCAGCAGGTTTAATGGGTAACGTCATCTG
TTTCAATGTTCTTTTTAAGAAGGGAGATGCTTGAGCCTTTTGTCTCTGCATCCTGCTTCT
CCCGAATGAGCATTTGTATGCTGACATATCTGTATTCACTTTGCTTAAAAATCCAAGTAA
AAGTGCCAAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGCGGAGGAGAGCGGTTGCTTCCCTCCGACCGGCTGGAGGCTGCTGGAGGCGGGGCCGT
TACCCGCCGGCAGCTCGGAGCGAGCCGGGCGGCCAGAAAGCCGGCGCGCCCGAGCGCCAT
GATTCCTCTGGAGAAGCCGGGCAGCGGCGACTCCTCCCCGGCCGCCGCCTCCGGCTCGGG
CCGGGCCAGCCGGGGACCGAGCACGCCGCGCCGGCCGCCGCCGCCGGCCCGCGGGCTGCT
GACGGAGATCCGCACCGCCGTGCGCACCGAGCCCTTCCAGGACAGCTACAGCCTGAGCCC
GGGCCGGGAGCTGGGCAGGGGGAAATTTGCAGTGGTGAGGAAATGTATAAAGAAAGACTC
TGGAAGAGAATTTGCAGCAAAGTTCATGAGAAAAAGGAGAAAAGGCCAAGATTGTCGGAT
GGAAATAATTCACGAAATTGCTGTACTTGAACTAGCACAGGACAATCCTTGGGTCATTAA
CTTGCATGAAGTCTATGAAACGCCGTCGGAGATGATCTTAGTTCTGGAATATGCCGCTGG
GGGCGAGATCTTTGACCAGTGTGTGGCAGACAGAGAAGAAGCCTTTACGGAAAAAGATGT
TCAGAGACTCATGAGGCAGATCTTAGAAGGTGTCCGCTTTTTACACGCTCACGATGTGGT
GCATCTTGATCTGAAGCCTCAGAATATTCTGCTGACAAGTGAATCTCCGTTGGGTGACAT
TAAGATAGTCGACTTCGGACTTTCGAGAATCATGAAGAAGAGCGAGGAGCTGCGGGAGAT
TATGGGCACCCCTGAGTACGTGGCTCCTGAAATTCTTAGTTATGATCCTATCAGCATGGC
AACGGACATGTGGAGCATCGGAGTGCTGACGTACGTCATGCTGACGGGAGTGTCGCCTTT
CCTGGGCGACAGTAAACAAGAAACGTTCCTCAACATCTCGCGGATGAACTTAAATTATTC
TGAGGAGGAATTCGATGTTGTGTCCGAGTCGGCTGTTGACTTCATCAAGGCGCTTTTAGT
TAAGGAACCTGAAGATCGCGCCACTGCTGAAGAGTGTCTGAAACACCCATGGCTGGCACA
GGGCAGTGCCCAGGAACCGTCCTGCAAGCTGAAAGGGGCGCCCGAGGAAGCCCAGGCCCT
CCAGGAAGGCGATTCTGTGCCTGAAAGTAACTCAGACCCTCAGACACCCGAAACCCAGGA
GCCAGTCGTAACAGAGGAGTTAATTGTAGTTACTTCCTACACTTTAGGACAATGCAGACA
GTCGGAAAAAGAGAAAATGGAGCAAAAGGCCATTTCCAAACGATTTAAATTTGAGGAACC
TTTGCTACAGGAAATTCCAGGCGATTTTATCTACTGAGCAGCATCTCCCTCTAGGACTTG
AAAATTTCTACTTTGGGACCATTATTTATGAACTTCTGGCCAAATGGTACAGGTACTGAA
AGTGGATGACCAGGTGTCACTGATAGAACCTGAAATGACTGTCAGACTTGTGGAGTCAGA
GAAATCAAGCCAGATCTAGTCAAGTTGCCAACCAGCAGGTTTAATGGGTAACGTCATCTG
TTTCAATGTTCTTTTTAAGAAGGGAGATGCTTGAGCCTTTTGTCTCTGCATCCTGCTTCT
CCCGAATGAGCATTTGTATGCTGACATATCTGTATTCACTTTGCTTAAAAATCCAAGTAA
AAGTGCCAAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|30172716|gb|AAP22356.1| |
Protein identifier
|
gi|30172716|gb|AAP22356.1| |
|
1-319, gnl|bosTau2|chr4 (42708633-42708958) |
|
1-319, gnl|dasNov1|scaffold_126206 (8387-8017) |
|
1-319, gnl|echTel1|scaffold_277571 (14714-14360) |
|
1-319, gnl|hg17|chr7 (43395833-43396207) |
|
1-319, gnl|Hg17|chr7 (43395961-43396289) |
|
1-319, gnl|loxAfr1|scaffold_15038 (35471-35138) |
|
1-319, gnl|oryCun1|scaffold_203462 (70654-70376) |
|
1-319, gnl|panTro1|chr6 (40848603-40848229) |
|
1-319, gnl|rheMac2|chr3 (82670431-82670058) |
|
1-319, gnl|xenTro1|scaffold_3442 (11506-11185) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-319, gnl|bosTau2|chr4 (42708633-42708958) |
|
1-319, gnl|dasNov1|scaffold_126206 (8387-8017) |
|
1-319, gnl|echTel1|scaffold_277571 (14714-14360) |
|
1-319, gnl|hg17|chr7 (43395833-43396207) |
|
1-319, gnl|Hg17|chr7 (43395961-43396289) |
|
1-319, gnl|loxAfr1|scaffold_15038 (35471-35138) |
|
1-319, gnl|oryCun1|scaffold_203462 (70654-70376) |
|
1-319, gnl|panTro1|chr6 (40848603-40848229) |
|
1-319, gnl|rheMac2|chr3 (82670431-82670058) |
|
1-319, gnl|xenTro1|scaffold_3442 (11506-11185) |
|
thg (0.760746) |
|
cbl (0.688784) |
|
sin (0.349895) |
|
rec (0.346141) |
|
cly (0.241284) |
|
med (0.232504) |
|
jej (0.197844) |
|
nep (0.183925) |
|
gul (0.177588) |
|
duo (0.172801) |
|
cje (0.165235) |
|
csp (0.161186) |
|
ski (0.146735) |
|
spl (0.143184) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
ute (0.132784) |
|
cov (0.132153) |
|
eru (0.120048) |
|
clu (0.119646) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
thg (0.760746) |
|
cbl (0.688784) |
|
sin (0.349895) |
|
rec (0.346141) |
|
cly (0.241284) |
|
med (0.232504) |
|
jej (0.197844) |
|
nep (0.183925) |
|
gul (0.177588) |
|
duo (0.172801) |
|
cje (0.165235) |
|
csp (0.161186) |
|
ski (0.146735) |
|
spl (0.143184) |
|
pty (0.142714) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
ute (0.132784) |
|
cov (0.132153) |
|
eru (0.120048) |
|
clu (0.119646) |
|
pgl (0.118483) |
|
ebs (0.118301) |
