Ss1.1-Pig4-TMW8060P10.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGACTGTCATAAATTAAATTTATTTTCCAAAGAACATGGTCCTTGGGTGTTGAATGGT AGATGGGGGAGGACAACTGGGGCCTCAGGCTGGGGTGCCAGATGCCAGGAGAGACCCTCA GAGTGACTCCTCAGGGTATTAAAGTCAGCATCTCAGGGAGGCCCCCCTCCCCCAACCACC AGTCCCCCTTCACTTCTTCTTCTTCTTGCGGCCCCAGCACTGGCGGCCTGCCTTCCGCCC GCCTCCGTCTTCTCTTCTGCTCTGCCAGCTGGGCATGGGAGGCTCCAGCTCATCTGGGCG GCCCCCCCGGTCTGGCACGCTGCCCATGAGCACCTTGTTGATAGCACAGCAGGTCCCTCG GCGGGCAGTCTTGCTAGTGGCGGGGACAAGGCGAGACAGGTCAGCTCGGGCAGCCAGGAC ATGTGCGACAGAGACATCAGATTCCGGGGTCAGAGCCTCTCGAATTGGGATCAGCACTGC CTTCATGGCCTCTCCTTGGGCCTCTGCTCGCTCACTCCAGTGGAAAGCAGACGTTGTGAG GTCCAGGCGCTTGAGGAGGAGGCAGCGGCGGCAGCAGTACTGATCTTGCAGGCTTTGCGA GAGAGACTCCAGCGCTTCCCATCTGGGGGCATCCAGCGGGTAGCTGAGAAGAGGCTGCAG GAACCCTGGGGGCAGGGAAGGCAGCAGCTCTGAGATCTTGGCATGCAACTCCCGCAGCAG CTGGCTGGCGGGGGTCCCCCGCGGAGGTCTGGGCAGTCCCAGGGCTTGGAGAGTAAGCAC CAGTTCCTGGACCAGGCCAGATTCCTCCTCTGCCCCCTCCCCTGCCCACTCTCCACCGAA TGGCTCAAGGCTGGGATCCAGCTTGGGTTGCAGGTGGAGTAGGCGGGCCGCCTGGAGCTC CGAGCAGAGAAAGCGCAGCAGGCGCAGGCGCGCGCCCGGCTTCCGCAGGGAGGATGCGCA GTCTCTGCCGCAGAGCTCTCGATCGGGGCAGTGCAACTCCCGCAAAAGGCCGGCCAACTG TCGCAGGAATTCCTCCTCGGCGCCAGGACCGTCGCCGGCGCTCAGTGCCTCCGTGCCTTC CTCTTTCTCCCGCTCCAGGGCGTCCAGCGTCGCCAGCTCTGCCGCCAGCCGCGCGCACAG CGCCCTGAAGTCTGGGCACGAGGGGCCCGGCGACGCCCTCTCTGGGAAACCCTCATACCC CAGGGCCAGCAGGTCCCCGGCCAAGGCGGCCCACTCCCGCTCCTCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGACTGTCATAAATTAAATTTATTTTCCAAAGAACATGGTCCTTGGGTGTTGAATGGT AGATGGGGGAGGACAACTGGGGCCTCAGGCTGGGGTGCCAGATGCCAGGAGAGACCCTCA GAGTGACTCCTCAGGGTATTAAAGTCAGCATCTCAGGGAGGCCCCCCTCCCCCAACCACC AGTCCCCCTTCACTTCTTCTTCTTCTTGCGGCCCCAGCACTGGCGGCCTGCCTTCCGCCC GCCTCCGTCTTCTCTTCTGCTCTGCCAGCTGGGCATGGGAGGCTCCAGCTCATCTGGGCG GCCCCCCCGGTCTGGCACGCTGCCCATGAGCACCTTGTTGATAGCACAGCAGGTCCCTCG GCGGGCAGTCTTGCTAGTGGCGGGGACAAGGCGAGACAGGTCAGCTCGGGCAGCCAGGAC ATGTGCGACAGAGACATCAGATTCCGGGGTCAGAGCCTCTCGAATTGGGATCAGCACTGC CTTCATGGCCTCTCCTTGGGCCTCTGCTCGCTCACTCCAGTGGAAAGCAGACGTTGTGAG GTCCAGGCGCTTGAGGAGGAGGCAGCGGCGGCAGCAGTACTGATCTTGCAGGCTTTGCGA GAGAGACTCCAGCGCTTCCCATCTGGGGGCATCCAGCGGGTAGCTGAGAAGAGGCTGCAG GAACCCTGGGGGCAGGGAAGGCAGCAGCTCTGAGATCTTGGCATGCAACTCCCGCAGCAG CTGGCTGGCGGGGGTCCCCCGCGGAGGTCTGGGCAGTCCCAGGGCTTGGAGAGTAAGCAC CAGTTCCTGGACCAGGCCAGATTCCTCCTCTGCCCCCTCCCCTGCCCACTCTCCACCGAA TGGCTCAAGGCTGGGATCCAGCTTGGGTTGCAGGTGGAGTAGGCGGGCCGCCTGGAGCTC CGAGCAGAGAAAGCGCAGCAGGCGCAGGCGCGCGCCCGGCTTCCGCAGGGAGGATGCGCA GTCTCTGCCGCAGAGCTCTCGATCGGGGCAGTGCAACTCCCGCAAAAGGCCGGCCAACTG TCGCAGGAATTCCTCCTCGGCGCCAGGACCGTCGCCGGCGCTCAGTGCCTCCGTGCCTTC CTCTTTCTCCCGCTCCAGGGCGTCCAGCGTCGCCAGCTCTGCCGCCAGCCGCGCGCACAG CGCCCTGAAGTCTGGGCACGAGGGGCCCGGCGACGCCCTCTCTGGGAAACCCTCATACCC CAGGGCCAGCAGGTCCCCGGCCAAGGCGGCCCACTCCCGCTCCTCCGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 6-335, gnl|bosTau2|chr18 (41093629-41093963) | |
| 6-335, gnl|Hg17|chr19 (43591565-43591229) | |
| 6-335, gnl|Mm7|chr7 (26091947-26092283) | |
| 501-619, gnl|bosTau2|chr18 (41095781-41095899) | |
| 501-619, gnl|canFam2|chr1 (117509646-117509534) | |
| 501-619, gnl|hg17|chr19 (43587974-43588089) | |
| 501-619, gnl|Hg17|chr19 (43588116-43587998) | |
| 501-619, gnl|loxAfr1|scaffold_115438 (5295-5181) | |
| 501-619, gnl|mm7|chr7 (26093994-26093881) | |
| 501-619, gnl|Mm7|chr7 (26093852-26093970) | |
| 501-619, gnl|monDom2|scaffold_139 (512269-512406) | |
| 501-619, gnl|panTro1|chr20 (40493243-40493358) | |
| 501-619, gnl|rn3|chr1 (84365631-84365518) | |
| 697-914, gnl|bosTau2|chr18 (41096304-41096509) | |
| 697-914, gnl|canFam2|chr1 (117510863-117510579) | |
| 697-914, gnl|dasNov1|scaffold_205299 (424-134) | |
| 697-914, gnl|echTel1|scaffold_319092 (56622-56967) | |
| 697-914, gnl|hg17|chr19 (43587380-43587666) | |
| 697-914, gnl|Hg17|chr19 (43587593-43587388) | |
| 697-914, gnl|loxAfr1|scaffold_115438 (6005-5590) | |
| 697-914, gnl|mm7|chr7 (26094798-26094526) | |
| 697-914, gnl|Mm7|chr7 (26094586-26094791) | |
| 697-914, gnl|monDom2|scaffold_139 (511445-511712) | |
| 697-914, gnl|panTro1|chr20 (40492649-40492935) | |
| 697-914, gnl|rn3|chr1 (84366425-84366153) | |
| 1048-1199, gnl|bosTau2|chr18 (41097252-41097403) | |
| 1048-1199, gnl|canFam2|chr1 (117511836-117511576) | |
| 1048-1199, gnl|dasNov1|scaffold_205299 (1240-990) | |
| 1048-1199, gnl|echTel1|scaffold_319092 (55773-56029) | |
| 1048-1199, gnl|hg17|chr19 (43585783-43586036) | |
| 1048-1199, gnl|Hg17|chr19 (43585968-43585817) | |
| 1048-1199, gnl|mm7|chr7 (26095483-26095251) | |
| 1048-1199, gnl|Mm7|chr7 (26095317-26095465) | |
| 1048-1199, gnl|monDom2|scaffold_139 (510559-510846) | |
| 1048-1199, gnl|panTro1|chr20 (40490489-40490742) | |
| 1048-1199, gnl|rn3|chr1 (84367102-84366870) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 6-335, gnl|bosTau2|chr18 (41093629-41093963) | |
| 6-335, gnl|Hg17|chr19 (43591565-43591229) | |
| 6-335, gnl|Mm7|chr7 (26091947-26092283) | |
| 501-619, gnl|bosTau2|chr18 (41095781-41095899) | |
| 501-619, gnl|canFam2|chr1 (117509646-117509534) | |
| 501-619, gnl|hg17|chr19 (43587974-43588089) | |
| 501-619, gnl|Hg17|chr19 (43588116-43587998) | |
| 501-619, gnl|loxAfr1|scaffold_115438 (5295-5181) | |
| 501-619, gnl|mm7|chr7 (26093994-26093881) | |
| 501-619, gnl|Mm7|chr7 (26093852-26093970) | |
| 501-619, gnl|monDom2|scaffold_139 (512269-512406) | |
| 501-619, gnl|panTro1|chr20 (40493243-40493358) | |
| 501-619, gnl|rn3|chr1 (84365631-84365518) | |
| 697-914, gnl|bosTau2|chr18 (41096304-41096509) | |
| 697-914, gnl|canFam2|chr1 (117510863-117510579) | |
| 697-914, gnl|dasNov1|scaffold_205299 (424-134) | |
| 697-914, gnl|echTel1|scaffold_319092 (56622-56967) | |
| 697-914, gnl|hg17|chr19 (43587380-43587666) | |
| 697-914, gnl|Hg17|chr19 (43587593-43587388) | |
| 697-914, gnl|loxAfr1|scaffold_115438 (6005-5590) | |
| 697-914, gnl|mm7|chr7 (26094798-26094526) | |
| 697-914, gnl|Mm7|chr7 (26094586-26094791) | |
| 697-914, gnl|monDom2|scaffold_139 (511445-511712) | |
| 697-914, gnl|panTro1|chr20 (40492649-40492935) | |
| 697-914, gnl|rn3|chr1 (84366425-84366153) | |
| 1048-1199, gnl|bosTau2|chr18 (41097252-41097403) | |
| 1048-1199, gnl|canFam2|chr1 (117511836-117511576) | |
| 1048-1199, gnl|dasNov1|scaffold_205299 (1240-990) | |
| 1048-1199, gnl|echTel1|scaffold_319092 (55773-56029) | |
| 1048-1199, gnl|hg17|chr19 (43585783-43586036) | |
| 1048-1199, gnl|Hg17|chr19 (43585968-43585817) | |
| 1048-1199, gnl|mm7|chr7 (26095483-26095251) | |
| 1048-1199, gnl|Mm7|chr7 (26095317-26095465) | |
| 1048-1199, gnl|monDom2|scaffold_139 (510559-510846) | |
| 1048-1199, gnl|panTro1|chr20 (40490489-40490742) | |
| 1048-1199, gnl|rn3|chr1 (84367102-84366870) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| fce (0.271592) | |
| ton (0.1755) | |
| csp (0.161186) | |
| ute (0.132784) | |
| jej (0.0989218) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| ton (0.1755) | |
| csp (0.161186) | |
| ute (0.132784) | |
| jej (0.0989218) |