Ss1.1-Pig4-TMW8060P13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGACTTCCCCGGCTCAACCGCCCGCGCCGCCCGGCTGCTCCTCCTTCCTCCCCGGGGTG TCGCAGCGATGTTTAACCGCGCTGTGAGCCGGCTGAGCAGGAAGCGGCCGCCGTCAGATA TCCACGACAGTGATGGGAGTGCCAGCAGCAGCCACCAGAACCCCAAGAGCACAGCCAAGT GGGCGGCTTCTTTGGAGAATCTACTTGAAGACCCAGAAGGCGTGAAAAGATTTAGGGAGT TTTTAAAAAAAGAATTCAGTGAAGAGAATGTTTTGTTTTGGCTAGCCTGTGAAGATTTTA AGAAAACACAAGATAAAAAGCAGATGCAGGAAAAGGCAAAGGAGATATACATGACCTTTC TGTCCAGCAAGGCCTCATCACAAGTCAATGTTGAGGGCCAGTCCCGGCTCAATGAGAAGA TTCTGGAGGAACCACACCCACTGATGTTCCAAAAACTCCAGGACCAGATCTTCAACCTCA TGAAGTATGACAGCTACAGCCGCTTCTTAAAGTCTGACTTGTTCTTAAAACACAAGCGAA CCGAGGAAGAGGATGAAGATTCCACCGATGCCCAGACTGCGGCTAAACGAGCTTCGAGAA TTTATAATACATGAGCCCCTCCCCCCAAAGAGGCTGGCAGGACTGGCAGCTTTCCGGAGC AAAGGAACTCATTCTCAGGGCCAGGCAGGATTCATAACGGCTTTGTTATCTGCAAGGACT GAAATGTACAAAACCCTTCCATGGGATATGTGTATTCGATTACCTGCTTGGCCAGTAAGT TTTGCATGATGGCTCATCTTACATAAAAAAGACAAATAGCTTTGCCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGACTTCCCCGGCTCAACCGCCCGCGCCGCCCGGCTGCTCCTCCTTCCTCCCCGGGGTG TCGCAGCGATGTTTAACCGCGCTGTGAGCCGGCTGAGCAGGAAGCGGCCGCCGTCAGATA TCCACGACAGTGATGGGAGTGCCAGCAGCAGCCACCAGAACCCCAAGAGCACAGCCAAGT GGGCGGCTTCTTTGGAGAATCTACTTGAAGACCCAGAAGGCGTGAAAAGATTTAGGGAGT TTTTAAAAAAAGAATTCAGTGAAGAGAATGTTTTGTTTTGGCTAGCCTGTGAAGATTTTA AGAAAACACAAGATAAAAAGCAGATGCAGGAAAAGGCAAAGGAGATATACATGACCTTTC TGTCCAGCAAGGCCTCATCACAAGTCAATGTTGAGGGCCAGTCCCGGCTCAATGAGAAGA TTCTGGAGGAACCACACCCACTGATGTTCCAAAAACTCCAGGACCAGATCTTCAACCTCA TGAAGTATGACAGCTACAGCCGCTTCTTAAAGTCTGACTTGTTCTTAAAACACAAGCGAA CCGAGGAAGAGGATGAAGATTCCACCGATGCCCAGACTGCGGCTAAACGAGCTTCGAGAA TTTATAATACATGAGCCCCTCCCCCCAAAGAGGCTGGCAGGACTGGCAGCTTTCCGGAGC AAAGGAACTCATTCTCAGGGCCAGGCAGGATTCATAACGGCTTTGTTATCTGCAAGGACT GAAATGTACAAAACCCTTCCATGGGATATGTGTATTCGATTACCTGCTTGGCCAGTAAGT TTTGCATGATGGCTCATCTTACATAAAAAAGACAAATAGCTTTGCCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 115-240, gnl|bosTau2|chr26 (25688833-25688958) | |
| 115-240, gnl|canFam2|chr28 (32701368-32701246) | |
| 115-240, gnl|dasNov1|scaffold_57207 (9855-9972) | |
| 115-240, gnl|echTel1|scaffold_234298 (13908-14025) | |
| 115-240, gnl|Hg17|chr10 (121276929-121276804) | |
| 115-240, gnl|hg17|chr8 (74905909-74906031) | |
| 115-240, gnl|loxAfr1|scaffold_38608 (3936-4051) | |
| 115-240, gnl|mm7|chr7 (124501036-124500919) | |
| 115-240, gnl|Mm7|chr7 (124501038-124500913) | |
| 115-240, gnl|oryCun1|scaffold_165049 (5379-5271) | |
| 115-240, gnl|panTro1|chr7 (76946595-76946717) | |
| 115-240, gnl|rheMac2|chr8 (76336796-76336918) | |
| 115-240, gnl|rn3|chr1 (187799192-187799075) | |
| 466-824, gnl|bosTau2|chr26 (25716581-25716932) | |
| 466-824, gnl|canFam2|chr28 (32674037-32674283) | |
| 466-824, gnl|dasNov1|scaffold_36126 (11090-11341) | |
| 466-824, gnl|echTel1|scaffold_220556 (930-1175) | |
| 466-824, gnl|galGal2|chr6 (29247397-29247638) | |
| 466-824, gnl|hg17|chr10 (121249406-121249647) | |
| 466-824, gnl|Hg17|chr10 (121249763-121249413) | |
| 466-824, gnl|loxAfr1|scaffold_5305 (78022-77785) | |
| 466-824, gnl|mm7|chr7 (124470265-124470486) | |
| 466-824, gnl|Mm7|chr7 (124470602-124470272) | |
| 466-824, gnl|monDom2|scaffold_14 (40751561-40751294) | |
| 466-824, gnl|oryCun1|scaffold_140953 (8851-9084) | |
| 466-824, gnl|panTro1|chr8 (123519441-123519682) | |
| 466-824, gnl|rheMac2|chr9 (119124171-119124414) | |
| 466-824, gnl|rn3|chr1 (187772456-187772683) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 115-240, gnl|bosTau2|chr26 (25688833-25688958) | |
| 115-240, gnl|canFam2|chr28 (32701368-32701246) | |
| 115-240, gnl|dasNov1|scaffold_57207 (9855-9972) | |
| 115-240, gnl|echTel1|scaffold_234298 (13908-14025) | |
| 115-240, gnl|Hg17|chr10 (121276929-121276804) | |
| 115-240, gnl|hg17|chr8 (74905909-74906031) | |
| 115-240, gnl|loxAfr1|scaffold_38608 (3936-4051) | |
| 115-240, gnl|mm7|chr7 (124501036-124500919) | |
| 115-240, gnl|Mm7|chr7 (124501038-124500913) | |
| 115-240, gnl|oryCun1|scaffold_165049 (5379-5271) | |
| 115-240, gnl|panTro1|chr7 (76946595-76946717) | |
| 115-240, gnl|rheMac2|chr8 (76336796-76336918) | |
| 115-240, gnl|rn3|chr1 (187799192-187799075) | |
| 466-824, gnl|bosTau2|chr26 (25716581-25716932) | |
| 466-824, gnl|canFam2|chr28 (32674037-32674283) | |
| 466-824, gnl|dasNov1|scaffold_36126 (11090-11341) | |
| 466-824, gnl|echTel1|scaffold_220556 (930-1175) | |
| 466-824, gnl|galGal2|chr6 (29247397-29247638) | |
| 466-824, gnl|hg17|chr10 (121249406-121249647) | |
| 466-824, gnl|Hg17|chr10 (121249763-121249413) | |
| 466-824, gnl|loxAfr1|scaffold_5305 (78022-77785) | |
| 466-824, gnl|mm7|chr7 (124470265-124470486) | |
| 466-824, gnl|Mm7|chr7 (124470602-124470272) | |
| 466-824, gnl|monDom2|scaffold_14 (40751561-40751294) | |
| 466-824, gnl|oryCun1|scaffold_140953 (8851-9084) | |
| 466-824, gnl|panTro1|chr8 (123519441-123519682) | |
| 466-824, gnl|rheMac2|chr9 (119124171-119124414) | |
| 466-824, gnl|rn3|chr1 (187772456-187772683) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.265604) | |
| cag (0.151194) | |
| nbm (0.0993246) |