Non-Coding RNA Search

Ss1.1-Pig4-TMW8061A20.3

Sequence:


               
               CCCCCCTCCAATGATATTACCTAATTTATTTGGTGCTATACTGAAGTAATATTTATTTGC
TGTATCTTACTCTTTCCCACTCTTAGCCAAAAAATAAGATTTCTATAGCCCTGGGGTGAG
GAGAACCCAGGAACAGGGAGTTAGCTGATGACTGTTGGCTCCCCTGCCCAGCCTTCTTAG
CCAACGGTATTATTGAGAAAGGGCAGTCAGTGATCCAGCCCCACTGCAGGGAATGGCACA
CTGTGCCGGCCTTTCCCCCAATTGCAAAGGAAAGAATTTTGGCTCGGTCTTGACTAACCA
GGTTCATGTAACTTTTTCACGACTCTTGCTCAGAGAACAAGCCAGTGATGTAGGGTCTGG
GACTCTCCATGCCACCAGTTCACCCTTCTAATCTGCTCCTCTGTTCAACCTGTGTGAGGC
TAAGGGCTGGAAGAAGAATTGCCCTGGAGTTTGAAGAGGAGGACAGCTGTGGGAGTCTTT
TTGTTGTGGGAGTCTCTTTGTTATGCCCCCTCCTTACCAGAGCCTGTTGATCTATGCCTT
GCTCCTCACTGCATATTTATTTGAAATTTGTAGCACTGATCTGCAGTACAGTTTTTTTGA
GTTTCTTGAACAGAAGAAGTAGGCAAGGGAACCCAAGTGGTACTGGAAATATGCCTCAGT
CTCCTGTATGGAAATGGTGAGAGGTGAGATGAGTGATGTTTATATACCTCTTTCCTCTGT
GATGATCAAAAGATATAAGAAGCTGGAGAGATTAAACATTGAGCCCTGTGCATGTTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCCCTCCAATGATATTACCTAATTTATTTGGTGCTATACTGAAGTAATATTTATTTGC
TGTATCTTACTCTTTCCCACTCTTAGCCAAAAAATAAGATTTCTATAGCCCTGGGGTGAG
GAGAACCCAGGAACAGGGAGTTAGCTGATGACTGTTGGCTCCCCTGCCCAGCCTTCTTAG
CCAACGGTATTATTGAGAAAGGGCAGTCAGTGATCCAGCCCCACTGCAGGGAATGGCACA
CTGTGCCGGCCTTTCCCCCAATTGCAAAGGAAAGAATTTTGGCTCGGTCTTGACTAACCA
GGTTCATGTAACTTTTTCACGACTCTTGCTCAGAGAACAAGCCAGTGATGTAGGGTCTGG
GACTCTCCATGCCACCAGTTCACCCTTCTAATCTGCTCCTCTGTTCAACCTGTGTGAGGC
TAAGGGCTGGAAGAAGAATTGCCCTGGAGTTTGAAGAGGAGGACAGCTGTGGGAGTCTTT
TTGTTGTGGGAGTCTCTTTGTTATGCCCCCTCCTTACCAGAGCCTGTTGATCTATGCCTT
GCTCCTCACTGCATATTTATTTGAAATTTGTAGCACTGATCTGCAGTACAGTTTTTTTGA
GTTTCTTGAACAGAAGAAGTAGGCAAGGGAACCCAAGTGGTACTGGAAATATGCCTCAGT
CTCCTGTATGGAAATGGTGAGAGGTGAGATGAGTGATGTTTATATACCTCTTTCCTCTGT
GATGATCAAAAGATATAAGAAGCTGGAGAGATTAAACATTGAGCCCTGTGCATGTTAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-776, gnl|bosTau2|chr3 (16410493-16411258)
               

               
               6-776, gnl|Hg17|chr1 (147946086-147945293)
               

               
               6-776, gnl|Mm7|chr3 (95012784-95013475)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-776, gnl|bosTau2|chr3 (16410493-16411258)
               

               
               6-776, gnl|Hg17|chr1 (147946086-147945293)
               

               
               6-776, gnl|Mm7|chr3 (95012784-95013475)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hyp (0.142837)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               lnt (0.142308)

	6-776, gnl\|bosTau2\|chr3 (16410493-16411258)
	6-776, gnl\|Hg17\|chr1 (147946086-147945293)
	6-776, gnl\|Mm7\|chr3 (95012784-95013475)