Ss1.1-Pig4-TMW8061D08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGTACTTCACATTTGTTTCCCATAAAGAGAGAAGAGATAGATATGGGAAAGGACTAAAA TTGTTTAAAATGAGAAAGGGAGCAAGAGTAATCTTTTCAGCCTTACAATTTGGGATATAA AGGCAAGGGTTGTTTGAGGTTCTTCAATTTAATTATGATAAATTAGAGGTTTCTTTGCAA AGACATAAATACCAAAATTTCATTCATTTTTTCTTCTGTTCTCATTAGTTTGGCTGAATA TAATTAGAGGTTAATTTTAATTACTATAAAATATCAAGATGTTTGTTCACCAAGATACAA ATAACTTTTGAGATCCTAGAAAAGGTTAAATATTATCATGGAGTCCAGCTGAACATTTTA GTTAGCTGATATCTTTCTGGTTTTGGAAGTGAGACCTAGGTAGTATTTCTCTGCTTGAAG TGGTCCTTTGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATTATTCTTCAGA GAGGGAGGGGAGTCCAAAAGTAGTGTGTACATCTAAACCTCCTATTTATCTTCAGCATCA AGGTCATAGTCGAACAATTGTTGGAATTGAAGAGAGAAAAAACCGAACATTATGTTTACT AATATTTGATCCTGGATGGCCTTCTCGAGACATGCAGAAATTCTTAAAGCAAGACATGGA AGCTAGCAGTCTCAAGCAACTTCGGAAATTTGTGGGAAATTTAAAACATAAGCAGTATCA GATAGTGGCAGTAGAAGGTGTTCTTTCTTCAGAGGAGAAAATTGCCAGGAGACAAGCTTC TCAAGTCTTTACAGCTGAGAAGATTCCTTGAAGAAGTAAGCATGTCAGTGATTGTGGAAT TTTACTTTATTTTTCAAATCCAGATATTAAATTTATTAATATATCTTATGAATCTGAATT TTTTAAATACTCCACTTTTAATTTCTAAAATGTCTAAATTACACCTTTAGTACTTCATTG TCTAGTAATTATTCCAATAAAATATCTTGTTTGCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGTACTTCACATTTGTTTCCCATAAAGAGAGAAGAGATAGATATGGGAAAGGACTAAAA TTGTTTAAAATGAGAAAGGGAGCAAGAGTAATCTTTTCAGCCTTACAATTTGGGATATAA AGGCAAGGGTTGTTTGAGGTTCTTCAATTTAATTATGATAAATTAGAGGTTTCTTTGCAA AGACATAAATACCAAAATTTCATTCATTTTTTCTTCTGTTCTCATTAGTTTGGCTGAATA TAATTAGAGGTTAATTTTAATTACTATAAAATATCAAGATGTTTGTTCACCAAGATACAA ATAACTTTTGAGATCCTAGAAAAGGTTAAATATTATCATGGAGTCCAGCTGAACATTTTA GTTAGCTGATATCTTTCTGGTTTTGGAAGTGAGACCTAGGTAGTATTTCTCTGCTTGAAG TGGTCCTTTGGGTACACACCCTCGCTTATTTGAATGGATATTGAACTATTATTCTTCAGA GAGGGAGGGGAGTCCAAAAGTAGTGTGTACATCTAAACCTCCTATTTATCTTCAGCATCA AGGTCATAGTCGAACAATTGTTGGAATTGAAGAGAGAAAAAACCGAACATTATGTTTACT AATATTTGATCCTGGATGGCCTTCTCGAGACATGCAGAAATTCTTAAAGCAAGACATGGA AGCTAGCAGTCTCAAGCAACTTCGGAAATTTGTGGGAAATTTAAAACATAAGCAGTATCA GATAGTGGCAGTAGAAGGTGTTCTTTCTTCAGAGGAGAAAATTGCCAGGAGACAAGCTTC TCAAGTCTTTACAGCTGAGAAGATTCCTTGAAGAAGTAAGCATGTCAGTGATTGTGGAAT TTTACTTTATTTTTCAAATCCAGATATTAAATTTATTAATATATCTTATGAATCTGAATT TTTTAAATACTCCACTTTTAATTTCTAAAATGTCTAAATTACACCTTTAGTACTTCATTG TCTAGTAATTATTCCAATAAAATATCTTGTTTGCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 23-415, gnl|bosTau2|chr9 (17019731-17019322) | |
| 23-415, gnl|Hg17|chr6 (117066042-117064070) | |
| 23-415, gnl|Mm7|chr10 (33701651-33701279) | |
| 541-764, gnl|bosTau2|chr9 (17020923-17020700) | |
| 541-764, gnl|canFam2|chr1 (60133121-60133371) | |
| 541-764, gnl|danRer3|chrUn (95579103-95578866) | |
| 541-764, gnl|dasNov1|scaffold_226467 (133-380) | |
| 541-764, gnl|echTel1|scaffold_208557 (2242-2490) | |
| 541-764, gnl|fr1|chrUn (96439063-96438827) | |
| 541-764, gnl|galGal2|chr3 (62196155-62195900) | |
| 541-764, gnl|hg17|chr6 (117073552-117073802) | |
| 541-764, gnl|Hg17|chr6 (117073792-117073569) | |
| 541-764, gnl|mm7|chr10 (33708038-33708282) | |
| 541-764, gnl|Mm7|chr10 (33708267-33708044) | |
| 541-764, gnl|monDom2|scaffold_0 (100877706-100877446) | |
| 541-764, gnl|oryCun1|scaffold_132668 (4199-4446) | |
| 541-764, gnl|panTro1|chr5 (119472642-119472892) | |
| 541-764, gnl|rheMac2|chr4 (147297216-147296966) | |
| 541-764, gnl|rn3|chr20 (30118446-30118691) | |
| 541-764, gnl|xenTro1|scaffold_373 (475432-475172) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 23-415, gnl|bosTau2|chr9 (17019731-17019322) | |
| 23-415, gnl|Hg17|chr6 (117066042-117064070) | |
| 23-415, gnl|Mm7|chr10 (33701651-33701279) | |
| 541-764, gnl|bosTau2|chr9 (17020923-17020700) | |
| 541-764, gnl|canFam2|chr1 (60133121-60133371) | |
| 541-764, gnl|danRer3|chrUn (95579103-95578866) | |
| 541-764, gnl|dasNov1|scaffold_226467 (133-380) | |
| 541-764, gnl|echTel1|scaffold_208557 (2242-2490) | |
| 541-764, gnl|fr1|chrUn (96439063-96438827) | |
| 541-764, gnl|galGal2|chr3 (62196155-62195900) | |
| 541-764, gnl|hg17|chr6 (117073552-117073802) | |
| 541-764, gnl|Hg17|chr6 (117073792-117073569) | |
| 541-764, gnl|mm7|chr10 (33708038-33708282) | |
| 541-764, gnl|Mm7|chr10 (33708267-33708044) | |
| 541-764, gnl|monDom2|scaffold_0 (100877706-100877446) | |
| 541-764, gnl|oryCun1|scaffold_132668 (4199-4446) | |
| 541-764, gnl|panTro1|chr5 (119472642-119472892) | |
| 541-764, gnl|rheMac2|chr4 (147297216-147296966) | |
| 541-764, gnl|rn3|chr20 (30118446-30118691) | |
| 541-764, gnl|xenTro1|scaffold_373 (475432-475172) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| bfe (0.149858) | |
| liv (0.146284) | |
| spc (0.113366) |