Ss1.1-Pig4-TMW8061F06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATAAGAAGAACGGTTTTCAAAACTGAAAATTCAATATTAAGGAAACTTTACGGGGACGTT CCTTTCATAGAAGAAAGACACAGACATCGCTATGAGGTGAATCCTAGCCTGATCAACCAA CTTGAGCAGAATGACTTAAGTTTTGTAGGTCAGGATGTCGATGGGGAGAGGATGGAAATC ATTGAACTAGCAAATCACCCGTATTTTGTCGGAGTCCAGTTCCATCCTGAGTTTTCCTCT AGGCCTATGAAGCCTTCCCCTCCATACCTGGGGCTCTTACTTGCGGCAACTGGGAATCTG AATGCCTACCTGCTGCGGGGCTGCAAACTGTCTTCCAGTGATCGATACAGCGACGCCAGT GATGACAGTTTTTCAGAGCCCAGGATAGCCGAGTTGGACATCAGCTGAAACCGATGCGTG ACTTGGGATCCCCGGCTTTGCCTGCGAGGTAACGGAAGCCAAGATGAAGGAACTCTCTGA AGAAATCACCCCCACTCTGATAGAATCACTCCGTTCTCCACCAAACATGGGATGTACAGC CTCGAGGGGAGTCGAATCATACGTACGTCCATGAACCAGAATTTCACGCTGGTTTTCCTT TTCTTCCAGAAGTGACTTTGGGGTCTCACAAATTGCTTTAGCCGATTAAACTTCTCCCAA CAACGCTCAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATAAGAAGAACGGTTTTCAAAACTGAAAATTCAATATTAAGGAAACTTTACGGGGACGTT CCTTTCATAGAAGAAAGACACAGACATCGCTATGAGGTGAATCCTAGCCTGATCAACCAA CTTGAGCAGAATGACTTAAGTTTTGTAGGTCAGGATGTCGATGGGGAGAGGATGGAAATC ATTGAACTAGCAAATCACCCGTATTTTGTCGGAGTCCAGTTCCATCCTGAGTTTTCCTCT AGGCCTATGAAGCCTTCCCCTCCATACCTGGGGCTCTTACTTGCGGCAACTGGGAATCTG AATGCCTACCTGCTGCGGGGCTGCAAACTGTCTTCCAGTGATCGATACAGCGACGCCAGT GATGACAGTTTTTCAGAGCCCAGGATAGCCGAGTTGGACATCAGCTGAAACCGATGCGTG ACTTGGGATCCCCGGCTTTGCCTGCGAGGTAACGGAAGCCAAGATGAAGGAACTCTCTGA AGAAATCACCCCCACTCTGATAGAATCACTCCGTTCTCCACCAAACATGGGATGTACAGC CTCGAGGGGAGTCGAATCATACGTACGTCCATGAACCAGAATTTCACGCTGGTTTTCCTT TTCTTCCAGAAGTGACTTTGGGGTCTCACAAATTGCTTTAGCCGATTAAACTTCTCCCAA CAACGCTCAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 191-338, gnl|bosTau2|chrX (40270593-40270446) | |
| 191-338, gnl|canFam2|chrX (12730981-12731091) | |
| 191-338, gnl|danRer3|chr19 (39974402-39974295) | |
| 191-338, gnl|echTel1|scaffold_309409 (45726-45616) | |
| 191-338, gnl|fr1|chrUn (97368631-97368522) | |
| 191-338, gnl|hg17|chrX (16387316-16387426) | |
| 191-338, gnl|Hg17|chrX (16387468-16387321) | |
| 191-338, gnl|loxAfr1|scaffold_18267 (22892-22782) | |
| 191-338, gnl|mm7|chrX (157785575-157785465) | |
| 191-338, gnl|Mm7|chrX (157785421-157785568) | |
| 191-338, gnl|monDom2|scaffold_25 (23087451-23087341) | |
| 191-338, gnl|oryCun1|scaffold_179789 (49595-49485) | |
| 191-338, gnl|panTro1|chrX (16866387-16866497) | |
| 191-338, gnl|rheMac2|chrX (14354809-14354919) | |
| 191-338, gnl|rn3|chrX (52459906-52460016) | |
| 191-338, gnl|tetNig1|chrUn_random (135021810-135021700) | |
| 446-670, gnl|bosTau2|chrX (40254882-40254661) | |
| 446-670, gnl|canFam2|chrX (12715575-12715956) | |
| 446-670, gnl|dasNov1|scaffold_74646 (959-1332) | |
| 446-670, gnl|echTel1|scaffold_309409 (59533-59146) | |
| 446-670, gnl|hg17|chrX (16367247-16367641) | |
| 446-670, gnl|Hg17|chrX (16367550-16367328) | |
| 446-670, gnl|mm7|chrX (157805777-157805394) | |
| 446-670, gnl|Mm7|chrX (157805481-157805687) | |
| 446-670, gnl|oryCun1|scaffold_181600 (18811-19211) | |
| 446-670, gnl|panTro1|chrX (16846379-16846773) | |
| 446-670, gnl|rheMac2|chrX (14337203-14337596) | |
| 446-670, gnl|rn3|chrX (52440908-52441280) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 191-338, gnl|bosTau2|chrX (40270593-40270446) | |
| 191-338, gnl|canFam2|chrX (12730981-12731091) | |
| 191-338, gnl|danRer3|chr19 (39974402-39974295) | |
| 191-338, gnl|echTel1|scaffold_309409 (45726-45616) | |
| 191-338, gnl|fr1|chrUn (97368631-97368522) | |
| 191-338, gnl|hg17|chrX (16387316-16387426) | |
| 191-338, gnl|Hg17|chrX (16387468-16387321) | |
| 191-338, gnl|loxAfr1|scaffold_18267 (22892-22782) | |
| 191-338, gnl|mm7|chrX (157785575-157785465) | |
| 191-338, gnl|Mm7|chrX (157785421-157785568) | |
| 191-338, gnl|monDom2|scaffold_25 (23087451-23087341) | |
| 191-338, gnl|oryCun1|scaffold_179789 (49595-49485) | |
| 191-338, gnl|panTro1|chrX (16866387-16866497) | |
| 191-338, gnl|rheMac2|chrX (14354809-14354919) | |
| 191-338, gnl|rn3|chrX (52459906-52460016) | |
| 191-338, gnl|tetNig1|chrUn_random (135021810-135021700) | |
| 446-670, gnl|bosTau2|chrX (40254882-40254661) | |
| 446-670, gnl|canFam2|chrX (12715575-12715956) | |
| 446-670, gnl|dasNov1|scaffold_74646 (959-1332) | |
| 446-670, gnl|echTel1|scaffold_309409 (59533-59146) | |
| 446-670, gnl|hg17|chrX (16367247-16367641) | |
| 446-670, gnl|Hg17|chrX (16367550-16367328) | |
| 446-670, gnl|mm7|chrX (157805777-157805394) | |
| 446-670, gnl|Mm7|chrX (157805481-157805687) | |
| 446-670, gnl|oryCun1|scaffold_181600 (18811-19211) | |
| 446-670, gnl|panTro1|chrX (16846379-16846773) | |
| 446-670, gnl|rheMac2|chrX (14337203-14337596) | |
| 446-670, gnl|rn3|chrX (52440908-52441280) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fty (0.17584) | |
| lnt (0.142308) | |
| csk (0.140746) | |
| cly (0.120642) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| lnt (0.142308) | |
| csk (0.140746) | |
| cly (0.120642) |