Non-Coding RNA Search

Ss1.1-Pig4-TMW8061F13.3

Sequence:


               
               CTTTTAACGGAGGCCTCAATAATGATCACTTTGAACTGCTTGTGATTTCAGAAATAAAGC
TGTGAAGCAATACATGTGTACACTTATACTTTTCAATGTTAACTTTATGAAATGGTGAAG
AAAAATGGTTTATATACTCTTGCTAAACAGTTACGCTTAACGGTCGGAAGATTTGCTCTT
GGAATACTTAAGTGCTCACTGGCCAGATACCTAACAAATCCAGTTTTTGCATTTACCTTA
AATTAACTACATCATTATTTCCAAGAATTAAACTTGAAGGCATTCAATACCTTTCATCTA
GTTCTAAAGCGGGGATGCCTGACATGCTTTCCACAAGACTTTATTTCCATTTATCGAAAT
AAAGGTGTTTCTTTTCCCAGCGGAAGGGGGAGATGGGGTGGGTGGAGGTAGGGCATTTCT
TTCACATCTTTGTTCTCTAGTATAGTGGGGGGTGGGGGGTACAGCTTTATAAAAAGTTAC
CTTTCCTTGAAGCTTCATTTCTTGAAGCTTGCTTGTTGTCACTGAGAAATGTTCATGAAT
AACCTTCAACCAATGACTTGAATTGTGACTTTTCTCTAAGAATGGGTTACATTTTCCAAT
GCTTCCATACTTGTTTTTGAGTAAGCTGCTTGTTTAAAGTTTACTATATTCTATTAAAAA
AAAGTTGTCTTTTAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTAACGGAGGCCTCAATAATGATCACTTTGAACTGCTTGTGATTTCAGAAATAAAGC
TGTGAAGCAATACATGTGTACACTTATACTTTTCAATGTTAACTTTATGAAATGGTGAAG
AAAAATGGTTTATATACTCTTGCTAAACAGTTACGCTTAACGGTCGGAAGATTTGCTCTT
GGAATACTTAAGTGCTCACTGGCCAGATACCTAACAAATCCAGTTTTTGCATTTACCTTA
AATTAACTACATCATTATTTCCAAGAATTAAACTTGAAGGCATTCAATACCTTTCATCTA
GTTCTAAAGCGGGGATGCCTGACATGCTTTCCACAAGACTTTATTTCCATTTATCGAAAT
AAAGGTGTTTCTTTTCCCAGCGGAAGGGGGAGATGGGGTGGGTGGAGGTAGGGCATTTCT
TTCACATCTTTGTTCTCTAGTATAGTGGGGGGTGGGGGGTACAGCTTTATAAAAAGTTAC
CTTTCCTTGAAGCTTCATTTCTTGAAGCTTGCTTGTTGTCACTGAGAAATGTTCATGAAT
AACCTTCAACCAATGACTTGAATTGTGACTTTTCTCTAAGAATGGGTTACATTTTCCAAT
GCTTCCATACTTGTTTTTGAGTAAGCTGCTTGTTTAAAGTTTACTATATTCTATTAAAAA
AAAGTTGTCTTTTAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-676, gnl|bosTau2|chr11 (43403621-43402945)
               

               
               1-676, gnl|Hg17|chr2 (64030276-64030929)
               

               
               1-676, gnl|Mm7|chr11 (21273758-21273135)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-676, gnl|bosTau2|chr11 (43403621-43402945)
               

               
               1-676, gnl|Hg17|chr2 (64030276-64030929)
               

               
               1-676, gnl|Mm7|chr11 (21273758-21273135)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ldo (0.194005)
               

               
               mcp (0.170648)
               

               
               sug (0.127291)
               

               
               bla (0.124347)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.194005)
               

               
               mcp (0.170648)
               

               
               sug (0.127291)
               

               
               bla (0.124347)

	1-676, gnl\|bosTau2\|chr11 (43403621-43402945)
	1-676, gnl\|Hg17\|chr2 (64030276-64030929)
	1-676, gnl\|Mm7\|chr11 (21273758-21273135)