Ss1.1-Pig4-TMW8061I22.5
|
TTGTGCTCATGGATGATGCCATGGACTGCTTGATGTCTTTTTCAGATTTCCTTCTTGCCT
TCCAGATCCAGTTTTACTACTCAGAATTCCTGGAGAGCGTGGCTGCCATCTACCGGGACC
TGCTGTCAGGCAAGAACCCCAATACGGTGATTGTGCCCACGTCATCCAGCGGGCAGCACC
GCCAGCGGCCTGCCTTGGGCGAGGCCAGCACGTTGGAGGGTGTGGAGGCGTCGCTGTTCT
GCCAGTGCCTGGAAAACTTGTGTGACCGGCACAAGTACAGCTGCCCACCCCCAGCACTTG
TCAAAGAGGTCCTAAGCAACGTTCAGAGACTGACCTTCTATGGATTCCTCGTGGCTCTCT
CAAAGCATCATGGGATTAACCAAGCCCTAGGAGCTTTGCCTGACAAAGGGGACCTGATGC
ACGACCCAGCTATGGATGCGGAGCTGGAACGCCTGCTGGCGCAGATCCCAGGCCTGGTCA
ACCCGGTCACTGCCGGTCCAGAGGCCAGCTGCCTGCCTTCCCGGCCCCCTCCCCGGGTTG
GCTCCCCCTGGAGACCCCTCCATCATGCCCGCAAGGTGGATGCAGAGAGCGATGGCTCCA
CTGAAGAGACAGATGAGTCTGAGACTTGAGGAATCTGAAGGGTCTTGTCTCCCAAGCCCA
GCACCCTGCTCCCCCAACAGCCCTTGGAACGCCCGCAGCCTTCTCTCCTAGCCCTGTACC
ATGCTGCCCTCTGCTGGTCAAAGGCTAAGTAATGGCCCCAGCCCAGGGACCGGCCAGAGG
GGTTCTGATCATCAGCCAGGCTGAGCAGTGACCCTAAGTTAACAGGCTCCTCTCCCTGGC
CCTGTCAGCCTTTCATCAGGCCACATGCTGACAGAAGATTGAGCTGAGGCCAATGGAATG
GTGACTTGGCCTTAGCCTTTTGATGGTCATCCCTGTGTAAGGGTCATCTCCTCAGAGCAA
CTCCAAGGAGACCATGCAGGACCTTGCATGGTCAAGGGTGGCACCCAGTGATGCAGATAT
TAGGAGGACACAGCAGTGGTGGCCTTCTTTTCTGCTGGAATAATAGCCACCAGCCGTAAG
ATGGAGAAGGGTGGGCAAGACAATTGCAAAAACTGTTTTCAGTTCGCCTCTGTGTCTAAT
AGTTCAATGTGTGAAATGAATAAAGTCCCTTGTGTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTGTGCTCATGGATGATGCCATGGACTGCTTGATGTCTTTTTCAGATTTCCTTCTTGCCT
TCCAGATCCAGTTTTACTACTCAGAATTCCTGGAGAGCGTGGCTGCCATCTACCGGGACC
TGCTGTCAGGCAAGAACCCCAATACGGTGATTGTGCCCACGTCATCCAGCGGGCAGCACC
GCCAGCGGCCTGCCTTGGGCGAGGCCAGCACGTTGGAGGGTGTGGAGGCGTCGCTGTTCT
GCCAGTGCCTGGAAAACTTGTGTGACCGGCACAAGTACAGCTGCCCACCCCCAGCACTTG
TCAAAGAGGTCCTAAGCAACGTTCAGAGACTGACCTTCTATGGATTCCTCGTGGCTCTCT
CAAAGCATCATGGGATTAACCAAGCCCTAGGAGCTTTGCCTGACAAAGGGGACCTGATGC
ACGACCCAGCTATGGATGCGGAGCTGGAACGCCTGCTGGCGCAGATCCCAGGCCTGGTCA
ACCCGGTCACTGCCGGTCCAGAGGCCAGCTGCCTGCCTTCCCGGCCCCCTCCCCGGGTTG
GCTCCCCCTGGAGACCCCTCCATCATGCCCGCAAGGTGGATGCAGAGAGCGATGGCTCCA
CTGAAGAGACAGATGAGTCTGAGACTTGAGGAATCTGAAGGGTCTTGTCTCCCAAGCCCA
GCACCCTGCTCCCCCAACAGCCCTTGGAACGCCCGCAGCCTTCTCTCCTAGCCCTGTACC
ATGCTGCCCTCTGCTGGTCAAAGGCTAAGTAATGGCCCCAGCCCAGGGACCGGCCAGAGG
GGTTCTGATCATCAGCCAGGCTGAGCAGTGACCCTAAGTTAACAGGCTCCTCTCCCTGGC
CCTGTCAGCCTTTCATCAGGCCACATGCTGACAGAAGATTGAGCTGAGGCCAATGGAATG
GTGACTTGGCCTTAGCCTTTTGATGGTCATCCCTGTGTAAGGGTCATCTCCTCAGAGCAA
CTCCAAGGAGACCATGCAGGACCTTGCATGGTCAAGGGTGGCACCCAGTGATGCAGATAT
TAGGAGGACACAGCAGTGGTGGCCTTCTTTTCTGCTGGAATAATAGCCACCAGCCGTAAG
ATGGAGAAGGGTGGGCAAGACAATTGCAAAAACTGTTTTCAGTTCGCCTCTGTGTCTAAT
AGTTCAATGTGTGAAATGAATAAAGTCCCTTGTGTC
|
|
gi|61836345|ref|XP_615102.1| |
Protein identifier
|
gi|61836345|ref|XP_615102.1| |
|
78-290, gnl|bosTau2|chr15 (49118020-49117808) |
|
78-290, gnl|canFam2|chr18 (45450249-45450031) |
|
78-290, gnl|danRer3|chrNA (106207372-106207599) |
|
78-290, gnl|dasNov1|scaffold_3846 (43800-43583) |
|
78-290, gnl|galGal2|chr5 (20508306-20508098) |
|
78-290, gnl|hg17|chr11 (47135128-47135353) |
|
78-290, gnl|Hg17|chr11 (47135139-47135369) |
|
78-290, gnl|loxAfr1|scaffold_10400 (40931-41149) |
|
78-290, gnl|mm7|chr2 (91133392-91133176) |
|
78-290, gnl|Mm7|chr2 (91133382-91133160) |
|
78-290, gnl|monDom2|scaffold_33 (13053334-13053540) |
|
78-290, gnl|panTro1|chr9 (47652861-47653085) |
|
78-290, gnl|rheMac2|chr14 (24966238-24966016) |
|
78-290, gnl|rn3|chr3 (75535361-75535145) |
|
78-290, gnl|tetNig1|chrUn_random (108159025-108158858) |
|
78-290, gnl|xenTro1|scaffold_1009 (218587-218807) |
| |
|
640-1176, gnl|bosTau2|chr15 (49114181-49113670) |
|
640-1176, gnl|Hg17|chr11 (47139797-47140368) |
|
640-1176, gnl|Mm7|chr2 (91129476-91128965) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
78-290, gnl|bosTau2|chr15 (49118020-49117808) |
|
78-290, gnl|canFam2|chr18 (45450249-45450031) |
|
78-290, gnl|danRer3|chrNA (106207372-106207599) |
|
78-290, gnl|dasNov1|scaffold_3846 (43800-43583) |
|
78-290, gnl|galGal2|chr5 (20508306-20508098) |
|
78-290, gnl|hg17|chr11 (47135128-47135353) |
|
78-290, gnl|Hg17|chr11 (47135139-47135369) |
|
78-290, gnl|loxAfr1|scaffold_10400 (40931-41149) |
|
78-290, gnl|mm7|chr2 (91133392-91133176) |
|
78-290, gnl|Mm7|chr2 (91133382-91133160) |
|
78-290, gnl|monDom2|scaffold_33 (13053334-13053540) |
|
78-290, gnl|panTro1|chr9 (47652861-47653085) |
|
78-290, gnl|rheMac2|chr14 (24966238-24966016) |
|
78-290, gnl|rn3|chr3 (75535361-75535145) |
|
78-290, gnl|tetNig1|chrUn_random (108159025-108158858) |
|
78-290, gnl|xenTro1|scaffold_1009 (218587-218807) |
| |
|
640-1176, gnl|bosTau2|chr15 (49114181-49113670) |
|
640-1176, gnl|Hg17|chr11 (47139797-47140368) |
|
640-1176, gnl|Mm7|chr2 (91129476-91128965) |
|
fcc (0.39557) |
|
ebs (0.236602) |
|
fcc (0.39557) |
|
ebs (0.236602) |