Non-Coding RNA Search

Ss1.1-Pig4-TMW8061L17.3

Sequence:


               
               GACGCCTCGCTCCCTGAGCTGGCCACTTGCAGCTCCTCCCTGTCTCCGGTCCGGAGCCGG
TCGCTAAGCTTCAGCGAGCCCCAGCAGCCACCCCCTGCCATGAAATCTCACCTGATTGTC
ACTTCTCCACCCCGGGCCCAGAGCAGCGCCAGGAAAGCCCGTGGGGAGGCCAAGAAATGC
CGCAAGGTATACGGCATCGAGCACCGGGACCAGTGGTGCACAGCCTGCCGCTGGAAGAAG
GCGTGCCAGCGCTTCCTGGACTGAGCGTCCAGCGCCTGCCCAGAGGCCTGAGGACGGAGG
CAGGCGTGACCCAAGCCCTCAGCAGAAACTGCAAAGCTAGAGAGTGGACAGTGGGAGTTT
GGGCTCTATTGGCTAAGGTTTAATTCTTAAAACACTTTCCCCTCCCTTGCGGGAACGTTT
TATTTTTTAAAAGAAAAGAAACAAAAATATTTTTTTTTTCCTCTAAAATAGGAAAGAGCC
AAAACCGACCAAGGGTATTCTGCAGTGAACCAGAGACCAAAGAATTGATTAACCGTCCCC
CCCCCAACATCCCGCCTCTAGGGGATTAGTCTGTACCTACGGAAAGAAGGAGCAGCTCAT
TCTGTTTCCTGCGAGTTGGTGAATTCTTTGCTCTCTCACCTCTTCCAGAAGGGACTATGA
GCAAGATGAATTTACTTTTCTTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACGCCTCGCTCCCTGAGCTGGCCACTTGCAGCTCCTCCCTGTCTCCGGTCCGGAGCCGG
TCGCTAAGCTTCAGCGAGCCCCAGCAGCCACCCCCTGCCATGAAATCTCACCTGATTGTC
ACTTCTCCACCCCGGGCCCAGAGCAGCGCCAGGAAAGCCCGTGGGGAGGCCAAGAAATGC
CGCAAGGTATACGGCATCGAGCACCGGGACCAGTGGTGCACAGCCTGCCGCTGGAAGAAG
GCGTGCCAGCGCTTCCTGGACTGAGCGTCCAGCGCCTGCCCAGAGGCCTGAGGACGGAGG
CAGGCGTGACCCAAGCCCTCAGCAGAAACTGCAAAGCTAGAGAGTGGACAGTGGGAGTTT
GGGCTCTATTGGCTAAGGTTTAATTCTTAAAACACTTTCCCCTCCCTTGCGGGAACGTTT
TATTTTTTAAAAGAAAAGAAACAAAAATATTTTTTTTTTCCTCTAAAATAGGAAAGAGCC
AAAACCGACCAAGGGTATTCTGCAGTGAACCAGAGACCAAAGAATTGATTAACCGTCCCC
CCCCCAACATCCCGCCTCTAGGGGATTAGTCTGTACCTACGGAAAGAAGGAGCAGCTCAT
TCTGTTTCCTGCGAGTTGGTGAATTCTTTGCTCTCTCACCTCTTCCAGAAGGGACTATGA
GCAAGATGAATTTACTTTTCTTAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q9NS57_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9NS57_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               150-277, gnl|bosTau2|chr13 (35319255-35319126)
               

               
               150-277, gnl|Hg17|chr20 (61844673-61844886)
               

               
               150-277, gnl|Mm7|chr2 (181888002-181888126)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-277, gnl|bosTau2|chr13 (35319255-35319126)
               

               
               150-277, gnl|Hg17|chr20 (61844673-61844886)
               

               
               150-277, gnl|Mm7|chr2 (181888002-181888126)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               bla (0.248694)
               

               
               cki (0.165235)
               

               
               cli (0.152812)
               

               
               pty (0.142714)
               

               
               che (0.136314)
               

               
               ecc (0.115035)
               

               
               jca (0.11396)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.248694)
               

               
               cki (0.165235)
               

               
               cli (0.152812)
               

               
               pty (0.142714)
               

               
               che (0.136314)
               

               
               ecc (0.115035)
               

               
               jca (0.11396)

	150-277, gnl\|bosTau2\|chr13 (35319255-35319126)
	150-277, gnl\|Hg17\|chr20 (61844673-61844886)
	150-277, gnl\|Mm7\|chr2 (181888002-181888126)

	bla (0.248694)
	cki (0.165235)
	cli (0.152812)
	pty (0.142714)
	che (0.136314)
	ecc (0.115035)
	jca (0.11396)