Non-Coding RNA Search

Ss1.1-Pig4-TMW8061M14.3

Sequence:


               
               TGATATTTTGTTAATCTGAGAAATGTAAAAGAGCATTTGTTTTTACATCTTTCTTCATCT
AATTAGTAAAGCAAGATGGAATGTCACATTTTTAATTCGTTTTTCATGAGTTTGTGTTCC
TATGATACTTGAAAATCTTTACAGAAGAGATGCAGCTCTGCATTGCTTTTTCCATGCAGC
AATTACCAGTTACAAGTAGGGGGATTAACTCAAGATCGTGTGCTGAGTAGGTAATGGGGA
ATATAGGCATTGCTTAACCAGTTAGAATTGCTTAAAACTAATTGGACTTAAAACTTACAT
CAGTACCTACTTGCTTGTCAAGCAGTATAATTTAAGAGTGTAGGAAACATAAATAAGGAT
ATGAAGGTGTCAACTTGGTTAAAATTCACCATTTTATACGACTAAGCAATCATGTTAAAC
ATCTCTTTGCTGATTATTTATAAGGCGTTGGTATGGTGTTACGACTGAATTGTACCTTAT
TTATAGCCTTCACTCTCTTAGAATCTTGTCTTAGCTACAAAGCGGAATTGTTAGTCTTAA
CCTGGCCTCCCTTATTAAAGTTGTAGACTTAAAGGTTTATGGAAATGCATTAAGGTAGCA
GAAAAGTAAATATTTAAGTTTTGCTTTATGACAGCTATTACACATTAAACAAAATAGCTA
ATTTTTTTTTTTAAAGCTTTCATGAACAACTTGACAATTCTGGGTGATAAAATGTTGATT
ATATATTGTACTTGATTAAATGTAGGTATCACAGAATTAGATTGTTTATGCTAACTGGAC
CCATTAAAAGATAGTTACTTTTTGAGGCAGTGCAGAGCTCTCATAGAAAACTAAAATTAA
GACGTGTTATGATGGCCAAAACTCTGGCAGAACTTCATGTTTGGGTATGAATTATGTTTA
TATAGATTAAAAATAATTATTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGATATTTTGTTAATCTGAGAAATGTAAAAGAGCATTTGTTTTTACATCTTTCTTCATCT
AATTAGTAAAGCAAGATGGAATGTCACATTTTTAATTCGTTTTTCATGAGTTTGTGTTCC
TATGATACTTGAAAATCTTTACAGAAGAGATGCAGCTCTGCATTGCTTTTTCCATGCAGC
AATTACCAGTTACAAGTAGGGGGATTAACTCAAGATCGTGTGCTGAGTAGGTAATGGGGA
ATATAGGCATTGCTTAACCAGTTAGAATTGCTTAAAACTAATTGGACTTAAAACTTACAT
CAGTACCTACTTGCTTGTCAAGCAGTATAATTTAAGAGTGTAGGAAACATAAATAAGGAT
ATGAAGGTGTCAACTTGGTTAAAATTCACCATTTTATACGACTAAGCAATCATGTTAAAC
ATCTCTTTGCTGATTATTTATAAGGCGTTGGTATGGTGTTACGACTGAATTGTACCTTAT
TTATAGCCTTCACTCTCTTAGAATCTTGTCTTAGCTACAAAGCGGAATTGTTAGTCTTAA
CCTGGCCTCCCTTATTAAAGTTGTAGACTTAAAGGTTTATGGAAATGCATTAAGGTAGCA
GAAAAGTAAATATTTAAGTTTTGCTTTATGACAGCTATTACACATTAAACAAAATAGCTA
ATTTTTTTTTTTAAAGCTTTCATGAACAACTTGACAATTCTGGGTGATAAAATGTTGATT
ATATATTGTACTTGATTAAATGTAGGTATCACAGAATTAGATTGTTTATGCTAACTGGAC
CCATTAAAAGATAGTTACTTTTTGAGGCAGTGCAGAGCTCTCATAGAAAACTAAAATTAA
GACGTGTTATGATGGCCAAAACTCTGGCAGAACTTCATGTTTGGGTATGAATTATGTTTA
TATAGATTAAAAATAATTATTTCT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               3-924, gnl|bosTau2|chr29 (2206435-2205475)
               

               
               3-924, gnl|Hg17|chr11 (89574924-89574020)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-924, gnl|bosTau2|chr29 (2206435-2205475)
               

               
               3-924, gnl|Hg17|chr11 (89574924-89574020)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

Help | Less info


               
               vin (0.332557)
               

               
               clu (0.239292)
               

               
               lin (0.145603)
               

               
               thg (0.126791)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               clu (0.239292)
               

               
               lin (0.145603)
               

               
               thg (0.126791)
               

               
               tra (0.123092)

	3-924, gnl\|bosTau2\|chr29 (2206435-2205475)
	3-924, gnl\|Hg17\|chr11 (89574924-89574020)

	vin (0.332557)
	clu (0.239292)
	lin (0.145603)
	thg (0.126791)
	tra (0.123092)