Ss1.1-Pig4-TMW8061M20.3
|
AGCTGAAAAGCTACCCAGAACGGGGTCCCTGGAGCCAGCTTTTCGAGCGCACTGCAGCGT
CCTCCACGCTGGAAGATAAGCCCCCCGCCCCTTGGTGACTCGTTCATTCAGCCGGAGCTC
AGGGACCTCGGGACCTTCTGCCGGGTGCAGCCTGTTGGCTCCGCAGCTGGTGAAGCCTGC
AGAGCTGACTTTTTCCGCCCGCGTCTCCTGTTGAGAGAGGTGGCAGCACGTTCTGGGATG
TACATGCAGGTGGAGACACGCACCAGCTCCTGCCTCCATCTGAAAAGGGCTCCAGGCATC
AGGTCCTGGTCCCTGTTGGTTGGAATCGCGTCCATCGGCCTGGCTGCTGCGTATTACAGT
GGAGACAGTCTGGGCTGGAAGCTCTTCTACGTCTCCGGCTGCCTGTTCGTGGCCGTGCAG
AACCTGGAGGACTGGCAGGAAGCCATCTTCAGCAAGAGCACCGGGAAGGTTGTGCTGAAG
ACATCCAGCTTGTACCGGAAGCTGCTGACCCTCTGCAGAGCGGGCCACGAGCAGGTGGTG
GTGCAGCTCAGCGACATCCGGGACGTGAGCGTGGAGGAGGAGAAGGTCCGCTACTTCGGG
AAGGGCCACGTGGTGGTGCTTCGCTTTGCCACGGGCTTCTCCCACCCCCTCACCCAGAGC
GCCGTCATGGGCCACCGCGGTGACGTGGAGGCCATTGCCAGGCTCATCACTACTTTCCTG
GAGCTGCACCGCCTCGAGAGTCCTGCGGAGCCGTCCCAGAGCAGCGACAGTGAGGCCGAC
ATCCTTGGGGACCACAGCTGACCCTGCACACCCCCAGCTTGGCTGTGACCCCCGGCTCCG
GTGCCTCAGCAGGCCCAGAGGGCTGCCCGCAAGTCGGCCTCCGCTCCGGGCTTGGCCCTG
GCAGCTCCGGGGCAGGACCCTCCACCGTTCCTGCTGTTCGCTTCTGCCCCCTGAGCCAAA
CCACAGCAGGAGCACCTCTGGCCTCCCATCTGCCTCCTCCAGGAGTCAGACGACCTGCTA
ACCTCTGAAAGGGGAAGGCAGGACGCATGAAGCCCAGGGCCGAGCTGGGCCAGGACGCTC
TTCAGCCCCGGGTCCCAGGGCGGCAGTGAGGGCGTCAGGCAGGTCCTGCTGCGGATGTCA
CCTCTGTGCACAGACCCCCGGGATCCCTGCGTCTCCTGCCCAGCTCCCCACGCCATCCCT
CGCCAGGCCGGACACCCCCTGTGGTAGGAAGGAAGGTGCTTGCCCACGAGCTGCTGGGGC
TCAGTGGATGCCAAGGTGCCCGCCCACCCGCCCAGTGTGCTGCTGCCCCTCCCGAGGCCT
CCCCCACGACCGCAAAAGGCTCATCTCAGGCCCAGCCAGGCTTCGCCCCTCCCCGCCCCC
AAGTAGGCAGAGCTTCTCTAGCCTCCCGCAGCATTTACAGACCAGGATCCCTGAGTTCCC
TTAAAGCCGAGCGGGTTAAGGACCCGGTGTCAATGCTGCGGCGTGGGTTCAATCCCTGGC
CTGGGGACTGCATGCTGCAGGTGTGGCCAAAAAAGTAAAATAAAATAAAGGCGTGAACTG
CTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGCTGAAAAGCTACCCAGAACGGGGTCCCTGGAGCCAGCTTTTCGAGCGCACTGCAGCGT
CCTCCACGCTGGAAGATAAGCCCCCCGCCCCTTGGTGACTCGTTCATTCAGCCGGAGCTC
AGGGACCTCGGGACCTTCTGCCGGGTGCAGCCTGTTGGCTCCGCAGCTGGTGAAGCCTGC
AGAGCTGACTTTTTCCGCCCGCGTCTCCTGTTGAGAGAGGTGGCAGCACGTTCTGGGATG
TACATGCAGGTGGAGACACGCACCAGCTCCTGCCTCCATCTGAAAAGGGCTCCAGGCATC
AGGTCCTGGTCCCTGTTGGTTGGAATCGCGTCCATCGGCCTGGCTGCTGCGTATTACAGT
GGAGACAGTCTGGGCTGGAAGCTCTTCTACGTCTCCGGCTGCCTGTTCGTGGCCGTGCAG
AACCTGGAGGACTGGCAGGAAGCCATCTTCAGCAAGAGCACCGGGAAGGTTGTGCTGAAG
ACATCCAGCTTGTACCGGAAGCTGCTGACCCTCTGCAGAGCGGGCCACGAGCAGGTGGTG
GTGCAGCTCAGCGACATCCGGGACGTGAGCGTGGAGGAGGAGAAGGTCCGCTACTTCGGG
AAGGGCCACGTGGTGGTGCTTCGCTTTGCCACGGGCTTCTCCCACCCCCTCACCCAGAGC
GCCGTCATGGGCCACCGCGGTGACGTGGAGGCCATTGCCAGGCTCATCACTACTTTCCTG
GAGCTGCACCGCCTCGAGAGTCCTGCGGAGCCGTCCCAGAGCAGCGACAGTGAGGCCGAC
ATCCTTGGGGACCACAGCTGACCCTGCACACCCCCAGCTTGGCTGTGACCCCCGGCTCCG
GTGCCTCAGCAGGCCCAGAGGGCTGCCCGCAAGTCGGCCTCCGCTCCGGGCTTGGCCCTG
GCAGCTCCGGGGCAGGACCCTCCACCGTTCCTGCTGTTCGCTTCTGCCCCCTGAGCCAAA
CCACAGCAGGAGCACCTCTGGCCTCCCATCTGCCTCCTCCAGGAGTCAGACGACCTGCTA
ACCTCTGAAAGGGGAAGGCAGGACGCATGAAGCCCAGGGCCGAGCTGGGCCAGGACGCTC
TTCAGCCCCGGGTCCCAGGGCGGCAGTGAGGGCGTCAGGCAGGTCCTGCTGCGGATGTCA
CCTCTGTGCACAGACCCCCGGGATCCCTGCGTCTCCTGCCCAGCTCCCCACGCCATCCCT
CGCCAGGCCGGACACCCCCTGTGGTAGGAAGGAAGGTGCTTGCCCACGAGCTGCTGGGGC
TCAGTGGATGCCAAGGTGCCCGCCCACCCGCCCAGTGTGCTGCTGCCCCTCCCGAGGCCT
CCCCCACGACCGCAAAAGGCTCATCTCAGGCCCAGCCAGGCTTCGCCCCTCCCCGCCCCC
AAGTAGGCAGAGCTTCTCTAGCCTCCCGCAGCATTTACAGACCAGGATCCCTGAGTTCCC
TTAAAGCCGAGCGGGTTAAGGACCCGGTGTCAATGCTGCGGCGTGGGTTCAATCCCTGGC
CTGGGGACTGCATGCTGCAGGTGTGGCCAAAAAAGTAAAATAAAATAAAGGCGTGAACTG
CTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|13278804|gb|AAH04171.1| |
Protein identifier
|
gi|13278804|gb|AAH04171.1| |
|
196-323, gnl|bosTau2|chr19 (47493481-47493609) |
|
196-323, gnl|Hg17|chr17 (78000456-78000334) |
|
196-323, gnl|Mm7|chr11 (121337493-121337372) |
| |
|
513-678, gnl|bosTau2|chr19 (47496567-47496733) |
|
513-678, gnl|canFam2|chrUn (11744865-11745002) |
|
513-678, gnl|danRer3|chr12 (30893504-30893381) |
|
513-678, gnl|galGal2|chr18 (3339110-3338977) |
|
513-678, gnl|hg17|chr17 (77995599-77995733) |
|
513-678, gnl|Hg17|chr17 (77995777-77995614) |
|
513-678, gnl|loxAfr1|scaffold_110247 (622-752) |
|
513-678, gnl|mm7|chr11 (121333583-121333715) |
|
513-678, gnl|Mm7|chr11 (121333748-121333596) |
|
513-678, gnl|monDom2|scaffold_88 (342761-342895) |
|
513-678, gnl|oryCun1|scaffold_139165 (7943-7800) |
|
513-678, gnl|panTro1|chr19 (81774989-81775123) |
|
513-678, gnl|rheMac2|chr16 (77928106-77928240) |
|
513-678, gnl|rn3|chr10 (110471887-110472019) |
|
513-678, gnl|tetNig1|chrUn_random (23143967-23143839) |
| |
|
682-1014, gnl|bosTau2|chr19 (47497115-47497444) |
|
682-1014, gnl|Hg17|chr17 (77995288-77994942) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
196-323, gnl|bosTau2|chr19 (47493481-47493609) |
|
196-323, gnl|Hg17|chr17 (78000456-78000334) |
|
196-323, gnl|Mm7|chr11 (121337493-121337372) |
| |
|
513-678, gnl|bosTau2|chr19 (47496567-47496733) |
|
513-678, gnl|canFam2|chrUn (11744865-11745002) |
|
513-678, gnl|danRer3|chr12 (30893504-30893381) |
|
513-678, gnl|galGal2|chr18 (3339110-3338977) |
|
513-678, gnl|hg17|chr17 (77995599-77995733) |
|
513-678, gnl|Hg17|chr17 (77995777-77995614) |
|
513-678, gnl|loxAfr1|scaffold_110247 (622-752) |
|
513-678, gnl|mm7|chr11 (121333583-121333715) |
|
513-678, gnl|Mm7|chr11 (121333748-121333596) |
|
513-678, gnl|monDom2|scaffold_88 (342761-342895) |
|
513-678, gnl|oryCun1|scaffold_139165 (7943-7800) |
|
513-678, gnl|panTro1|chr19 (81774989-81775123) |
|
513-678, gnl|rheMac2|chr16 (77928106-77928240) |
|
513-678, gnl|rn3|chr10 (110471887-110472019) |
|
513-678, gnl|tetNig1|chrUn_random (23143967-23143839) |
| |
|
682-1014, gnl|bosTau2|chr19 (47497115-47497444) |
|
682-1014, gnl|Hg17|chr17 (77995288-77994942) |
|
med (0.232504) |
|
ecc (0.23007) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fhi (0.169578) |
|
ebs (0.118301) |
|
med (0.232504) |
|
ecc (0.23007) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fhi (0.169578) |
|
ebs (0.118301) |
