Non-Coding RNA Search

Ss1.1-Pig4-TMW8062B10.5

Sequence:


               
               GCGGCCGCGGAGTGGCCTGCGGGGGACCCTCCCCCAGAGGGGCCGGCCCGGGGCGGGGAA
ATGAACGGCTTTAGCACCGAGGAGGACAGCCGCGAAGGGCCCCCCGCCGCCCCCGCCGCC
GCCCCGGGCTACGGCCAGAGCTGCTGCCTCATCGAGGACGGCGAGCGCTGCGTCCGGCCC
GCGGGCAACGCCTCCTTCAGCAAGAGGGTCCAGAAGAGCATCTCGCAGAAGAAACTCAAG
CTGGACATCGACAAGAGCGTAAGGCACCTATATATCTGCGATTTCCACAAAAACTTCATC
CAGAGTGTACGAAATAAAAGGAAGAGGAAGACAAGTGACGATGGTGGAGACTCTCCTGAG
CACGACACAGACATTCCCGAGGTTGATCTGTTCCAGCTGCAGGTGAACACTCTCCGACGT
TATAAACGACACTACAAATTGCAGACCAGACCAGGCTTCAATAAGGCCCAGTTAGCAGAA
ACTGTCAGTCGACACTTCAGGAACATACCCGTGAACGAAAAGGAGACCCTGGCGTACTTC
ATCTACATGGTGAAGAGTAACAAGAGTAGACTGGACCAGAAATCAGAGGGCGGCAAGCAG
CTCGAGTGAGCGTGAAGCCCGTCTCCGGGGAATGAGGTGTGATGCTTAGTGCACAGGTGA
CATCTGCTACATCTACACCCATAAAGACTGTTAAATTTTATTGTAAATAAAAATGTTTGA
ATGGCCTAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCCGCGGAGTGGCCTGCGGGGGACCCTCCCCCAGAGGGGCCGGCCCGGGGCGGGGAA
ATGAACGGCTTTAGCACCGAGGAGGACAGCCGCGAAGGGCCCCCCGCCGCCCCCGCCGCC
GCCCCGGGCTACGGCCAGAGCTGCTGCCTCATCGAGGACGGCGAGCGCTGCGTCCGGCCC
GCGGGCAACGCCTCCTTCAGCAAGAGGGTCCAGAAGAGCATCTCGCAGAAGAAACTCAAG
CTGGACATCGACAAGAGCGTAAGGCACCTATATATCTGCGATTTCCACAAAAACTTCATC
CAGAGTGTACGAAATAAAAGGAAGAGGAAGACAAGTGACGATGGTGGAGACTCTCCTGAG
CACGACACAGACATTCCCGAGGTTGATCTGTTCCAGCTGCAGGTGAACACTCTCCGACGT
TATAAACGACACTACAAATTGCAGACCAGACCAGGCTTCAATAAGGCCCAGTTAGCAGAA
ACTGTCAGTCGACACTTCAGGAACATACCCGTGAACGAAAAGGAGACCCTGGCGTACTTC
ATCTACATGGTGAAGAGTAACAAGAGTAGACTGGACCAGAAATCAGAGGGCGGCAAGCAG
CTCGAGTGAGCGTGAAGCCCGTCTCCGGGGAATGAGGTGTGATGCTTAGTGCACAGGTGA
CATCTGCTACATCTACACCCATAAAGACTGTTAAATTTTATTGTAAATAAAAATGTTTGA
ATGGCCTAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|12845526|dbj|BAB26785.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|12845526|dbj|BAB26785.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-732, gnl|bosTau2|chr23 (20602608-20601889)
               

               
               2-732, gnl|Hg17|chr5 (153806299-153815900)
               

               
               2-732, gnl|Mm7|chr11 (57883579-57891753)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-732, gnl|bosTau2|chr23 (20602608-20601889)
               

               
               2-732, gnl|Hg17|chr5 (153806299-153815900)
               

               
               2-732, gnl|Mm7|chr11 (57883579-57891753)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               pla (0.401016)
               

               
               gul (0.177588)
               

               
               lnt (0.142308)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.401016)
               

               
               gul (0.177588)
               

               
               lnt (0.142308)

	2-732, gnl\|bosTau2\|chr23 (20602608-20601889)
	2-732, gnl\|Hg17\|chr5 (153806299-153815900)
	2-732, gnl\|Mm7\|chr11 (57883579-57891753)