Non-Coding RNA Search

Ss1.1-Pig4-TMW8062G02.5

Sequence:


               
               ATTTACTCCAAAACAATGCTTTCATGATCCCAACCCCCATTGATCTACTTTCTGTTTCCA
GTATTGGTATTAGGGAATATTTTGTGGAACTTTATTATCTTTTAGTGCATTTCCCATCGT
TTCACTTAAACCAAATTCCTTTATAGGATTGCTATGAGAATTAAAGGCTCTAATGAGAAT
ACATGGCATTATTAGTTATGGAAGTAATTGCTATTTGGTTACCAGTTCCCCCTCACTTGA
TAGCCATTCCTATAAGTTTATTAACCACTTGTTACTGCTTATAAGCCTGAAAGTTGCGTA
TTCACAACTCCAGGGGGTATCATTCACTTCAGTCATTGTAGATTTATATGGTTACTACAA
CCCTTTTCCAGCAGATGGCAGTAAAGTGTCCTGAAAGGGATACCTTTTTCCAATTCCCAA
AAAGTTGCCGTAAGGGCTAGCTGTGGGAGTGACTGAATACAACAATACTTCCATTATTTA
TCCTAAATTAATTTTTTTGGACAGTAAATGTTATTTTTAACATTGTCAATTACAGTAATT
GTAATTTAGTTTTCCCTGGTTTGTTATTTAAAATTAGATAATCTGTTTGGGGTTTTCAGT
TTTTCAAAAAATTGTAATTAAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTACTCCAAAACAATGCTTTCATGATCCCAACCCCCATTGATCTACTTTCTGTTTCCA
GTATTGGTATTAGGGAATATTTTGTGGAACTTTATTATCTTTTAGTGCATTTCCCATCGT
TTCACTTAAACCAAATTCCTTTATAGGATTGCTATGAGAATTAAAGGCTCTAATGAGAAT
ACATGGCATTATTAGTTATGGAAGTAATTGCTATTTGGTTACCAGTTCCCCCTCACTTGA
TAGCCATTCCTATAAGTTTATTAACCACTTGTTACTGCTTATAAGCCTGAAAGTTGCGTA
TTCACAACTCCAGGGGGTATCATTCACTTCAGTCATTGTAGATTTATATGGTTACTACAA
CCCTTTTCCAGCAGATGGCAGTAAAGTGTCCTGAAAGGGATACCTTTTTCCAATTCCCAA
AAAGTTGCCGTAAGGGCTAGCTGTGGGAGTGACTGAATACAACAATACTTCCATTATTTA
TCCTAAATTAATTTTTTTGGACAGTAAATGTTATTTTTAACATTGTCAATTACAGTAATT
GTAATTTAGTTTTCCCTGGTTTGTTATTTAAAATTAGATAATCTGTTTGGGGTTTTCAGT
TTTTCAAAAAATTGTAATTAAAGT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-167, gnl|bosTau2|chr2 (667791-667957)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-167, gnl|bosTau2|chr2 (667791-667957)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               tbr (0.154178)
               

               
               lyg (0.133103)
               

               
               ret (0.128733)
               

               
               thg (0.126791)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               lyg (0.133103)
               

               
               ret (0.128733)
               

               
               thg (0.126791)