Non-Coding RNA Search

Ss1.1-Pig4-TMW8062G18.3

Sequence:


               
               GAGCCTGGGCTCGGCCCCAGCCCACCCGCCCGCGCCTCCCCGGCGGCGCCACGTACCGGC
GCTGACATGGATCTTCTTCATCCAGGGAAGCAGAATCTATTTGGTTGTTTCCCTAAGAAA
AACGAGAACCTTCTAATAGCATCTCATTTGATGGAAGTGGCATTCAGAATTAAACATGCT
CGAATTTAATAGGTGCAATTGTGAGAGAGACGATGGGGATGGATAGAAGCGACGATGCCG
CCACAAAATACAGCATGGAAACCAACATCTTCCTACTAAAGAACACTCCCCAAACAAAAA
CAAGCTAAGGATAGCACAGGCATTGTGCCACCGGTCTTTTCCCGCTGAGAATGTTTTTGT
CTCAGCTTTTCCAGACTGAGACGAAAAGGTATATTTAAGAACAGTCTAGAGTTTCTGAAT
TACTGAAAGTTAGCATATTAACGACATCGGCAGCTCTGGAAAGTAGAGAAAGAGGACTTT
TGCCTGCCATTTGGTCATTGAAATATGATGGGTCAATTAACTGCCGTTATTGGCAAATGA
ATTACATATTAATTATACCTAATGTTGATCTCTGAAGTAAATACTGATGCCTTAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCCTGGGCTCGGCCCCAGCCCACCCGCCCGCGCCTCCCCGGCGGCGCCACGTACCGGC
GCTGACATGGATCTTCTTCATCCAGGGAAGCAGAATCTATTTGGTTGTTTCCCTAAGAAA
AACGAGAACCTTCTAATAGCATCTCATTTGATGGAAGTGGCATTCAGAATTAAACATGCT
CGAATTTAATAGGTGCAATTGTGAGAGAGACGATGGGGATGGATAGAAGCGACGATGCCG
CCACAAAATACAGCATGGAAACCAACATCTTCCTACTAAAGAACACTCCCCAAACAAAAA
CAAGCTAAGGATAGCACAGGCATTGTGCCACCGGTCTTTTCCCGCTGAGAATGTTTTTGT
CTCAGCTTTTCCAGACTGAGACGAAAAGGTATATTTAAGAACAGTCTAGAGTTTCTGAAT
TACTGAAAGTTAGCATATTAACGACATCGGCAGCTCTGGAAAGTAGAGAAAGAGGACTTT
TGCCTGCCATTTGGTCATTGAAATATGATGGGTCAATTAACTGCCGTTATTGGCAAATGA
ATTACATATTAATTATACCTAATGTTGATCTCTGAAGTAAATACTGATGCCTTAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               87-594, gnl|bosTau2|chr4 (37123059-37122524)
               

               
               87-594, gnl|Hg17|chr7 (26944380-26944930)
               

               
               87-594, gnl|Mm7|chr6 (52155719-52156249)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               87-594, gnl|bosTau2|chr4 (37123059-37122524)
               

               
               87-594, gnl|Hg17|chr7 (26944380-26944930)
               

               
               87-594, gnl|Mm7|chr6 (52155719-52156249)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               eje (0.0988338)

	87-594, gnl\|bosTau2\|chr4 (37123059-37122524)
	87-594, gnl\|Hg17\|chr7 (26944380-26944930)
	87-594, gnl\|Mm7\|chr6 (52155719-52156249)