Ss1.1-Pig4-TMW8062K05.5
|
AGGTGCAGGTCGGGGCGCCATGGCCGCGTGGGGCGAGCGGCTGGCTGGCGTGCGCGGGGT
GCTGCTCGACATCTCGGGCGTGCTGTACGACGGCGGCGAGGGCGGCGGCGCGGCGATCGC
GGGCTCCGTGGAGGCGGTGGCGAGGCTGAAGCGGTCCCGGCTGAAGGTGAGGTTCTGCAC
CAACGAGTCACAGAAGTCCCGGGGGGACCTGGTGCGGCTGCTTCGGCGGCTGGGCTTCGA
CATCTCCGAGGGCGAGGTGACCGCCCCAGCCCCGGCCACCTGCCTGATCCTGAAAGAGCG
AGGCCTGCGGCCACACCTGCTTGTCCACGATGGAGTCCGCTCGGAATTTGGCCAGATTGA
CACATCCAACCCAAACTGTGTCGTCATTGCTGATGCAGGAGAAGACTTTTCTTATCAAAA
CATGAATAAAGCATTCCAGGTCCTCATGGAGCTGGAAAAGCCCATACTCTTCTCGCTGGG
AAAAGGACGCTATTACAAGGAGACCTCTGGCCTGATGCTGGACGTCGGCCCCTACATGAA
GGCCCTGGAGTACGCCTGTGGTATCGAAGCCGAGGTGGTGGGGAAGCCTTCTCCGGAGTT
TTTCAAGTCTGCCCTGCGAGAGATGGGGGTGGATGCCTCCCAGGCCGTCATGATCGGGGA
TGACATCGTGGGCGATGTTGGCGGTGCCCAGCGGTGTGGCATCAGAGCGCTGCAGGTGCG
GACGGGGAAGTTCAGGCCCAGTGACGAGCATCACCCAGAAGTAAAGGCCGACGGATACGT
GGACAACCTCGCGGAGGCCGTGGACCTGCTGCTGCAGCATGCGGACCAGTGACGGGCCTT
CCGGGAGGGCCCCCAGCCTCCTGCCACCCTCCCCTGTACCCAGACCACCCTAGACCCTGC
CCTCTGCCCTGGACAGGCGGACGAGAGGGTCTGGGCCGGGCAGTTCTGGGCTCCCTGCCC
TGGGCCACCAGCCCCTCCTGTGCCTCCCTCTGCCCACACCCCCCTTCGCAGCACAGTTTG
ATCCCCACCTGAGGGCCTGGCCCCTGCCTCGCTTCCCTGCTGAGGTCAGGAAGTGGGCGC
ACCTGCTGGATCCCCGCTCTCACTCTCCATTTGTGCTTTAATTGCGCTGGCACACTAGCC
CCGGGCATTTGCTCTCTAGTCCTTGCCTTTTAGGGAGGCGCCTGGAGAAAGCTGGGCCTC
CCGGGCACGGGCCTTGCAGCCCAGAGCTGAGCCAGCCTCCCTCCGACTCTGCCCAACGGC
CCTGTCCCCGCCCAGCGTCAGGGAGGCCGCTCAGTGCTCCCCATGCCCCCCAAGGATTCA
GCCCACCTTTCCGTCCCAGGTCCCCTTTGGAGCCGGAATAGAGAGGCACCCGGGGCCCTC
AGGAGGCAGTCGTCCTACACAGCAACAAGTGTTACCTTGGGAATCCAGGTTGCAGGCAGA
GGGTACTTCTGGAGCCCTAGCTCAATGGACCCAGGGTGCACAGGAGGAAACAGTTAAATA
AAAACTCCTTCCTGAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGTGCAGGTCGGGGCGCCATGGCCGCGTGGGGCGAGCGGCTGGCTGGCGTGCGCGGGGT
GCTGCTCGACATCTCGGGCGTGCTGTACGACGGCGGCGAGGGCGGCGGCGCGGCGATCGC
GGGCTCCGTGGAGGCGGTGGCGAGGCTGAAGCGGTCCCGGCTGAAGGTGAGGTTCTGCAC
CAACGAGTCACAGAAGTCCCGGGGGGACCTGGTGCGGCTGCTTCGGCGGCTGGGCTTCGA
CATCTCCGAGGGCGAGGTGACCGCCCCAGCCCCGGCCACCTGCCTGATCCTGAAAGAGCG
AGGCCTGCGGCCACACCTGCTTGTCCACGATGGAGTCCGCTCGGAATTTGGCCAGATTGA
CACATCCAACCCAAACTGTGTCGTCATTGCTGATGCAGGAGAAGACTTTTCTTATCAAAA
CATGAATAAAGCATTCCAGGTCCTCATGGAGCTGGAAAAGCCCATACTCTTCTCGCTGGG
AAAAGGACGCTATTACAAGGAGACCTCTGGCCTGATGCTGGACGTCGGCCCCTACATGAA
GGCCCTGGAGTACGCCTGTGGTATCGAAGCCGAGGTGGTGGGGAAGCCTTCTCCGGAGTT
TTTCAAGTCTGCCCTGCGAGAGATGGGGGTGGATGCCTCCCAGGCCGTCATGATCGGGGA
TGACATCGTGGGCGATGTTGGCGGTGCCCAGCGGTGTGGCATCAGAGCGCTGCAGGTGCG
GACGGGGAAGTTCAGGCCCAGTGACGAGCATCACCCAGAAGTAAAGGCCGACGGATACGT
GGACAACCTCGCGGAGGCCGTGGACCTGCTGCTGCAGCATGCGGACCAGTGACGGGCCTT
CCGGGAGGGCCCCCAGCCTCCTGCCACCCTCCCCTGTACCCAGACCACCCTAGACCCTGC
CCTCTGCCCTGGACAGGCGGACGAGAGGGTCTGGGCCGGGCAGTTCTGGGCTCCCTGCCC
TGGGCCACCAGCCCCTCCTGTGCCTCCCTCTGCCCACACCCCCCTTCGCAGCACAGTTTG
ATCCCCACCTGAGGGCCTGGCCCCTGCCTCGCTTCCCTGCTGAGGTCAGGAAGTGGGCGC
ACCTGCTGGATCCCCGCTCTCACTCTCCATTTGTGCTTTAATTGCGCTGGCACACTAGCC
CCGGGCATTTGCTCTCTAGTCCTTGCCTTTTAGGGAGGCGCCTGGAGAAAGCTGGGCCTC
CCGGGCACGGGCCTTGCAGCCCAGAGCTGAGCCAGCCTCCCTCCGACTCTGCCCAACGGC
CCTGTCCCCGCCCAGCGTCAGGGAGGCCGCTCAGTGCTCCCCATGCCCCCCAAGGATTCA
GCCCACCTTTCCGTCCCAGGTCCCCTTTGGAGCCGGAATAGAGAGGCACCCGGGGCCCTC
AGGAGGCAGTCGTCCTACACAGCAACAAGTGTTACCTTGGGAATCCAGGTTGCAGGCAGA
GGGTACTTCTGGAGCCCTAGCTCAATGGACCCAGGGTGCACAGGAGGAAACAGTTAAATA
AAAACTCCTTCCTGAAAAAAAAAA
|
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143-333, gnl|bosTau2|chr26 (29923138-29923328) |
|
143-333, gnl|Hg17|chr10 (126162696-126162886) |
|
143-333, gnl|Mm7|chr7 (129035374-129035564) |
| |
|
634-736, gnl|bosTau2|chr26 (29951889-29951991) |
|
634-736, gnl|canFam2|chr28 (36878790-36878949) |
|
634-736, gnl|echTel1|scaffold_190088 (586-424) |
|
634-736, gnl|galGal2|chrUn (148733217-148733377) |
|
634-736, gnl|hg17|chr10 (126195677-126195838) |
|
634-736, gnl|Hg17|chr10 (126195732-126195831) |
|
634-736, gnl|loxAfr1|scaffold_103370 (24742-24903) |
|
634-736, gnl|mm7|chr7 (129055092-129055251) |
|
634-736, gnl|Mm7|chr7 (129055145-129055244) |
|
634-736, gnl|monDom2|scaffold_62 (10789992-10790133) |
|
634-736, gnl|oryCun1|scaffold_197114 (10447-10288) |
|
634-736, gnl|panTro1|chr8 (128696723-128696884) |
|
634-736, gnl|rheMac2|chr9 (124116675-124116836) |
|
634-736, gnl|rn3|chr1 (192272956-192273115) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
143-333, gnl|bosTau2|chr26 (29923138-29923328) |
|
143-333, gnl|Hg17|chr10 (126162696-126162886) |
|
143-333, gnl|Mm7|chr7 (129035374-129035564) |
| |
|
634-736, gnl|bosTau2|chr26 (29951889-29951991) |
|
634-736, gnl|canFam2|chr28 (36878790-36878949) |
|
634-736, gnl|echTel1|scaffold_190088 (586-424) |
|
634-736, gnl|galGal2|chrUn (148733217-148733377) |
|
634-736, gnl|hg17|chr10 (126195677-126195838) |
|
634-736, gnl|Hg17|chr10 (126195732-126195831) |
|
634-736, gnl|loxAfr1|scaffold_103370 (24742-24903) |
|
634-736, gnl|mm7|chr7 (129055092-129055251) |
|
634-736, gnl|Mm7|chr7 (129055145-129055244) |
|
634-736, gnl|monDom2|scaffold_62 (10789992-10790133) |
|
634-736, gnl|oryCun1|scaffold_197114 (10447-10288) |
|
634-736, gnl|panTro1|chr8 (128696723-128696884) |
|
634-736, gnl|rheMac2|chr9 (124116675-124116836) |
|
634-736, gnl|rn3|chr1 (192272956-192273115) |
|
ecc (0.23007) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
nco (0.161734) |
|
csp (0.161186) |
|
cli (0.152812) |
|
med (0.116252) |
|
jej (0.0989218) |
|
eje (0.0988338) |
|
ecc (0.23007) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
nco (0.161734) |
|
csp (0.161186) |
|
cli (0.152812) |
|
med (0.116252) |
|
jej (0.0989218) |
|
eje (0.0988338) |
