Non-Coding RNA Search

Ss1.1-Pig4-TMW8062P15.5

Sequence:


               
               TTTTTTTTAAACTGTGGTCACCAACAGGGGTAATTAACTAAACACTCTAAGTAGTAAGAA
AGAAAATATGCCAAACTTAGTATTTGGAACTTTAACTCTGAGTTCCTTTCTATAGTTCCC
TTTGTAACTTGACTATCTAAAATGTTAAAATACTAACTTCTGTTGCTTCATTTGATATAA
TTTATAGACTATTAGAATGGAGTTAGAGAAAGAATATATAATATTTAATGTCATTCTATT
TCAAGTAGTTTTTCTAAAATAATACTTAAAATTGATTTATTCCTTGTAACATAAAAACTT
CAGTTAAATCATGTCTCTTAAAAACATGATAGCCATACACATAAATACCACCAATAAAAT
CGTTTTGTAAGTCTCTAAACTAATACTTAAATGGCATACATCCTTTACCTACTCTACAGT
TTTTCAAATTAGAATCCTGTCATTGTAAAAGAATAGATAGTTTTAAAACTGCATAATATG
ATTGTGGTTGAAAATCACATACTTAATCTTATTTATGTTCATTAATTCCATTTGTATAAT
AGCACCTATCTTTGTTCTATTTATTGTCTTATGTTCTAGAGAGTAGGATTTTTATTCCTT
TTTAAACTGTGTACCTAATATGTATACAATAAATTAAAAGATCTATATAACAATATTTCA
AAGACATTTCTTTCAACAAATGTGCAGTTTAACCACAGTGAATAAATTTAAAGCTTGCCT
TTGAAATACATCATAGTGAAATCTGACTTGAGGTTTTTCAACACTTAAAATAAGCGTATG
TTTAATGGTGTATTTCCTTTTGAAAAATTATCAATCTACTTACCTAAAAACTTACCTTAA
TCTTTAATTTGTTTTAAATTCTTTAGTTTTTTTCATACTTTGTATGAATGGTGTAAAACA
TGCCATTTGAAATAAACTTCAAGCTGGCCCATACTCTGAGCTTTATAACTTCCTTACCGT
ATGGTTCATTGGCCATATAGCGTAGCTTGAGATATCTCAGTGGAAGACAGCTTAAGATAA
ACGGTTCTGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTAAACTGTGGTCACCAACAGGGGTAATTAACTAAACACTCTAAGTAGTAAGAA
AGAAAATATGCCAAACTTAGTATTTGGAACTTTAACTCTGAGTTCCTTTCTATAGTTCCC
TTTGTAACTTGACTATCTAAAATGTTAAAATACTAACTTCTGTTGCTTCATTTGATATAA
TTTATAGACTATTAGAATGGAGTTAGAGAAAGAATATATAATATTTAATGTCATTCTATT
TCAAGTAGTTTTTCTAAAATAATACTTAAAATTGATTTATTCCTTGTAACATAAAAACTT
CAGTTAAATCATGTCTCTTAAAAACATGATAGCCATACACATAAATACCACCAATAAAAT
CGTTTTGTAAGTCTCTAAACTAATACTTAAATGGCATACATCCTTTACCTACTCTACAGT
TTTTCAAATTAGAATCCTGTCATTGTAAAAGAATAGATAGTTTTAAAACTGCATAATATG
ATTGTGGTTGAAAATCACATACTTAATCTTATTTATGTTCATTAATTCCATTTGTATAAT
AGCACCTATCTTTGTTCTATTTATTGTCTTATGTTCTAGAGAGTAGGATTTTTATTCCTT
TTTAAACTGTGTACCTAATATGTATACAATAAATTAAAAGATCTATATAACAATATTTCA
AAGACATTTCTTTCAACAAATGTGCAGTTTAACCACAGTGAATAAATTTAAAGCTTGCCT
TTGAAATACATCATAGTGAAATCTGACTTGAGGTTTTTCAACACTTAAAATAAGCGTATG
TTTAATGGTGTATTTCCTTTTGAAAAATTATCAATCTACTTACCTAAAAACTTACCTTAA
TCTTTAATTTGTTTTAAATTCTTTAGTTTTTTTCATACTTTGTATGAATGGTGTAAAACA
TGCCATTTGAAATAAACTTCAAGCTGGCCCATACTCTGAGCTTTATAACTTCCTTACCGT
ATGGTTCATTGGCCATATAGCGTAGCTTGAGATATCTCAGTGGAAGACAGCTTAAGATAA
ACGGTTCTGTTT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               51-341, gnl|bosTau2|chr12 (11350457-11350146)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-341, gnl|bosTau2|chr12 (11350457-11350146)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               cte (0.29274)
               

               
               fty (0.17584)
               

               
               eli (0.151814)
               

               
               lin (0.145603)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               fty (0.17584)
               

               
               eli (0.151814)
               

               
               lin (0.145603)