Non-Coding RNA Search

Ss1.1-Pig4-TMW8063E15.5

Sequence:


               
               GTTTTTTAATGTTTTAACAGTTGTGCTTCCCGTACTTCATTCCAAGTTTGTGAAAAACGG
AAGTATTTTGACCTAGAGCTCTAAAGGGAGGTTTGGAACCCCGGAAAGGGTTTTGTTCCA
CACCATTCTGTTTCCAGACTAGATCATCCATCTCCAGCTGGTGGTAGTATGGGCTGCCTA
CTCCTACGCTCGGGGGTGGGCGTGAGGAGGGTGCTAACTACTACCTGACTGCTTTTCTGC
CTCCTAATTTCAACCCGAATCTCCGTTAATTCAACATCACCACTCGGAAGAGTTTTGCCG
ACTTTTGGGCACGGAATCGGAATAGATATTTCAGATTATGGTATGAATATTTTTGGGGCA
TTCTAATTGACCACTGTATCCCATCAAATTATGTAGAGATTTTCTTAAGGCTCAGGACAA
ATAGACAATATAATAAAGATTTTCATCTGGATTGGATCTTCTGTCTTCTGAAAGTAAAAT
ACTCTGTGGTGAAATTGGACTATTTTAAATAATTGGACCTTTTAACTGCAGTTCACTAGG
TTTTGGTGACTTAATTTTTTTTTGTAACTCTCTTACTCATCTGCCTGGGTTTGTGTTTCC
AGATTTAGATGTGGGAAAACGAACAGAACTTTTTTTTTCTTGAAAACTTGGATTTTTAAT
ATCAGCAGGTGGGGATAAATATATTAAGCACACTCTCAGTTTTTCTGAAGGCATTGGAAT
TTGTGCACAGTTTTTTCTTGCTCAGTGTATTAAAAGTAATTTTAACTATTTGCCCCAGTT
GAAGAATGAAGTTAATATATCGTGGGCTTTTGGGGGTCACTTCAGATTATTAATTTCAAA
GCAACTTGGTTTTTGATTATATATTTTAGTGATGAAGTTTTTTGTAACAATTTTTTAAAA
GTTTAACTAACAAACTTTTGACCAATAATAAAGCAGAAATAATTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTTAATGTTTTAACAGTTGTGCTTCCCGTACTTCATTCCAAGTTTGTGAAAAACGG
AAGTATTTTGACCTAGAGCTCTAAAGGGAGGTTTGGAACCCCGGAAAGGGTTTTGTTCCA
CACCATTCTGTTTCCAGACTAGATCATCCATCTCCAGCTGGTGGTAGTATGGGCTGCCTA
CTCCTACGCTCGGGGGTGGGCGTGAGGAGGGTGCTAACTACTACCTGACTGCTTTTCTGC
CTCCTAATTTCAACCCGAATCTCCGTTAATTCAACATCACCACTCGGAAGAGTTTTGCCG
ACTTTTGGGCACGGAATCGGAATAGATATTTCAGATTATGGTATGAATATTTTTGGGGCA
TTCTAATTGACCACTGTATCCCATCAAATTATGTAGAGATTTTCTTAAGGCTCAGGACAA
ATAGACAATATAATAAAGATTTTCATCTGGATTGGATCTTCTGTCTTCTGAAAGTAAAAT
ACTCTGTGGTGAAATTGGACTATTTTAAATAATTGGACCTTTTAACTGCAGTTCACTAGG
TTTTGGTGACTTAATTTTTTTTTGTAACTCTCTTACTCATCTGCCTGGGTTTGTGTTTCC
AGATTTAGATGTGGGAAAACGAACAGAACTTTTTTTTTCTTGAAAACTTGGATTTTTAAT
ATCAGCAGGTGGGGATAAATATATTAAGCACACTCTCAGTTTTTCTGAAGGCATTGGAAT
TTGTGCACAGTTTTTTCTTGCTCAGTGTATTAAAAGTAATTTTAACTATTTGCCCCAGTT
GAAGAATGAAGTTAATATATCGTGGGCTTTTGGGGGTCACTTCAGATTATTAATTTCAAA
GCAACTTGGTTTTTGATTATATATTTTAGTGATGAAGTTTTTTGTAACAATTTTTTAAAA
GTTTAACTAACAAACTTTTGACCAATAATAAAGCAGAAATAATTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-947, gnl|bosTau2|chr16 (3005825-3004872)
               

               
               1-947, gnl|Hg17|chr1 (202449597-202448653)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-947, gnl|bosTau2|chr16 (3005825-3004872)
               

               
               1-947, gnl|Hg17|chr1 (202449597-202448653)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               spl (0.143184)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)

	1-947, gnl\|bosTau2\|chr16 (3005825-3004872)
	1-947, gnl\|Hg17\|chr1 (202449597-202448653)