Ss1.1-Pig4-TMW8063F16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCACCCTGCCCGTCTCCGGCTCTCCCAGGCCCCCCACCCACCCCGACGAGGAAGCAGGAG ATTATTAAGATCACCGAGCAGCTCATCGAGGCCGTCAACAACGGGGACTTCGAGGCCTAC GCGAAAATCTGCGACCCAGGCCTGACCTCCTTTGAGCCCGAAGCCCTGGGCAATCTGGTT GAAGGAATGGACTTCCACAGATTCTACTTTGAGAATTTGCTCGCCAAGAACAGCAAGCCG ATCCACACAACCATCCTGAACCCGCACGTGCACGTCATCGGCGAGGACGCCGCCTGCATC GCCTACATCCGCCTGACGCAGTACATCGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCC GAGGAGACCCGCGTGTGGCACCGCCGAGATGGCAAGTGGCAGAACGTGCACTTCCACTGC TCGGGGGCACCCGTGGCCCCGCTGCAGTGAAGAGCTGCGGCTGGTTTCGCGGGACAGACT CGGTGTTCGGAGCCCAGCTGCCCTCGGGCGCGGCCTGCCTGTCGCATGTTTGTGTCTGCC TCGTTCCTCCCCTGGCGCCTGTGTCTGCAGAAAACCAAGACCAGATGTGATTTCTTTTTA AAAACCAGATGATGACGACAACCACACACACACACACACACACACACACCTGATGTTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCACCCTGCCCGTCTCCGGCTCTCCCAGGCCCCCCACCCACCCCGACGAGGAAGCAGGAG ATTATTAAGATCACCGAGCAGCTCATCGAGGCCGTCAACAACGGGGACTTCGAGGCCTAC GCGAAAATCTGCGACCCAGGCCTGACCTCCTTTGAGCCCGAAGCCCTGGGCAATCTGGTT GAAGGAATGGACTTCCACAGATTCTACTTTGAGAATTTGCTCGCCAAGAACAGCAAGCCG ATCCACACAACCATCCTGAACCCGCACGTGCACGTCATCGGCGAGGACGCCGCCTGCATC GCCTACATCCGCCTGACGCAGTACATCGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCC GAGGAGACCCGCGTGTGGCACCGCCGAGATGGCAAGTGGCAGAACGTGCACTTCCACTGC TCGGGGGCACCCGTGGCCCCGCTGCAGTGAAGAGCTGCGGCTGGTTTCGCGGGACAGACT CGGTGTTCGGAGCCCAGCTGCCCTCGGGCGCGGCCTGCCTGTCGCATGTTTGTGTCTGCC TCGTTCCTCCCCTGGCGCCTGTGTCTGCAGAAAACCAAGACCAGATGTGATTTCTTTTTA AAAACCAGATGATGACGACAACCACACACACACACACACACACACACACCTGATGTTGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 50 entry(ies) | More info |
| Aligned organism(s): 50 entry(ies) | Help | Less info |
| 218-452, gnl|bosTau2|chr4 (39155670-39155436) | |
| 218-452, gnl|canFam2|chrUn (33574319-33574072) | |
| 218-452, gnl|danRer3|chr9 (4312070-4312317) | |
| 218-452, gnl|dasNov1|scaffold_8314 (86188-86441) | |
| 218-452, gnl|echTel1|scaffold_325083 (5471-5218) | |
| 218-452, gnl|fr1|chrUn (204552688-204552450) | |
| 218-452, gnl|galGal2|chr13 (12151985-12151728) | |
| 218-452, gnl|hg17|chr7 (44032888-44033142) | |
| 218-452, gnl|Hg17|chr7 (44033133-44032899) | |
| 218-452, gnl|loxAfr1|scaffold_14435 (5560-5307) | |
| 218-452, gnl|mm7|chr11 (5924193-5924462) | |
| 218-452, gnl|Mm7|chr11 (5924453-5924220) | |
| 218-452, gnl|monDom2|scaffold_1 (155869147-155868893) | |
| 218-452, gnl|oryCun1|scaffold_146505 (251-526) | |
| 218-452, gnl|panTro1|chr6_random (30919893-30919639) | |
| 218-452, gnl|rheMac2|chr3 (82116468-82116214) | |
| 218-452, gnl|rn3|chr14 (86654257-86654509) | |
| 218-452, gnl|tetNig1|chrUn_random (693888-694121) | |
| 218-452, gnl|xenTro1|scaffold_217 (971784-972028) | |
| 224-450, gnl|bosTau2|chr28 (22952521-22952295) | |
| 224-450, gnl|canFam2|chr4 (27457159-27457422) | |
| 224-450, gnl|danRer3|chrUn (155565944-155566182) | |
| 224-450, gnl|dasNov1|scaffold_8314 (86200-86461) | |
| 224-450, gnl|echTel1|scaffold_325083 (5459-5196) | |
| 224-450, gnl|fr1|chrUn (46980155-46980399) | |
| 224-450, gnl|galGal2|chr6 (14932400-14932136) | |
| 224-450, gnl|hg17|chr10 (75244779-75245035) | |
| 224-450, gnl|Hg17|chr10 (75245005-75244779) | |
| 224-450, gnl|loxAfr1|scaffold_14435 (5548-5292) | |
| 224-450, gnl|mm7|chr14 (18393828-18394091) | |
| 224-450, gnl|Mm7|chr14 (18394054-18393828) | |
| 224-450, gnl|monDom2|scaffold_14 (1795841-1796092) | |
| 224-450, gnl|oryCun1|scaffold_146505 (272-540) | |
| 224-450, gnl|panTro1|chr8 (76450245-76450501) | |
| 224-450, gnl|rheMac2|chr9 (63204454-63204198) | |
| 224-450, gnl|rn3|chr15 (3785453-3785185) | |
| 224-450, gnl|tetNig1|chr17 (10677225-10676981) | |
| 224-450, gnl|xenTro1|scaffold_151 (169115-169358) | |
| 454-632, gnl|bosTau2|chr4 (39155161-39154978) | |
| 454-632, gnl|canFam2|chrUn (33575053-33574634) | |
| 454-632, gnl|echTel1|scaffold_175778 (3394-3929) | |
| 454-632, gnl|hg17|chr7 (44031797-44032312) | |
| 454-632, gnl|Hg17|chr7 (44032357-44032158) | |
| 454-632, gnl|loxAfr1|scaffold_14435 (6861-6322) | |
| 454-632, gnl|mm7|chr11 (5923312-5923781) | |
| 454-632, gnl|Mm7|chr11 (5923828-5923634) | |
| 454-632, gnl|monDom2|scaffold_1 (155872094-155871495) | |
| 454-632, gnl|panTro1|chr6_random (30920983-30920471) | |
| 454-632, gnl|rheMac2|chr3 (82117558-82117053) | |
| 454-632, gnl|rn3|chr14 (86653455-86653934) |
| Aligned organism(s): 50 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 218-452, gnl|bosTau2|chr4 (39155670-39155436) | |
| 218-452, gnl|canFam2|chrUn (33574319-33574072) | |
| 218-452, gnl|danRer3|chr9 (4312070-4312317) | |
| 218-452, gnl|dasNov1|scaffold_8314 (86188-86441) | |
| 218-452, gnl|echTel1|scaffold_325083 (5471-5218) | |
| 218-452, gnl|fr1|chrUn (204552688-204552450) | |
| 218-452, gnl|galGal2|chr13 (12151985-12151728) | |
| 218-452, gnl|hg17|chr7 (44032888-44033142) | |
| 218-452, gnl|Hg17|chr7 (44033133-44032899) | |
| 218-452, gnl|loxAfr1|scaffold_14435 (5560-5307) | |
| 218-452, gnl|mm7|chr11 (5924193-5924462) | |
| 218-452, gnl|Mm7|chr11 (5924453-5924220) | |
| 218-452, gnl|monDom2|scaffold_1 (155869147-155868893) | |
| 218-452, gnl|oryCun1|scaffold_146505 (251-526) | |
| 218-452, gnl|panTro1|chr6_random (30919893-30919639) | |
| 218-452, gnl|rheMac2|chr3 (82116468-82116214) | |
| 218-452, gnl|rn3|chr14 (86654257-86654509) | |
| 218-452, gnl|tetNig1|chrUn_random (693888-694121) | |
| 218-452, gnl|xenTro1|scaffold_217 (971784-972028) | |
| 224-450, gnl|bosTau2|chr28 (22952521-22952295) | |
| 224-450, gnl|canFam2|chr4 (27457159-27457422) | |
| 224-450, gnl|danRer3|chrUn (155565944-155566182) | |
| 224-450, gnl|dasNov1|scaffold_8314 (86200-86461) | |
| 224-450, gnl|echTel1|scaffold_325083 (5459-5196) | |
| 224-450, gnl|fr1|chrUn (46980155-46980399) | |
| 224-450, gnl|galGal2|chr6 (14932400-14932136) | |
| 224-450, gnl|hg17|chr10 (75244779-75245035) | |
| 224-450, gnl|Hg17|chr10 (75245005-75244779) | |
| 224-450, gnl|loxAfr1|scaffold_14435 (5548-5292) | |
| 224-450, gnl|mm7|chr14 (18393828-18394091) | |
| 224-450, gnl|Mm7|chr14 (18394054-18393828) | |
| 224-450, gnl|monDom2|scaffold_14 (1795841-1796092) | |
| 224-450, gnl|oryCun1|scaffold_146505 (272-540) | |
| 224-450, gnl|panTro1|chr8 (76450245-76450501) | |
| 224-450, gnl|rheMac2|chr9 (63204454-63204198) | |
| 224-450, gnl|rn3|chr15 (3785453-3785185) | |
| 224-450, gnl|tetNig1|chr17 (10677225-10676981) | |
| 224-450, gnl|xenTro1|scaffold_151 (169115-169358) | |
| 454-632, gnl|bosTau2|chr4 (39155161-39154978) | |
| 454-632, gnl|canFam2|chrUn (33575053-33574634) | |
| 454-632, gnl|echTel1|scaffold_175778 (3394-3929) | |
| 454-632, gnl|hg17|chr7 (44031797-44032312) | |
| 454-632, gnl|Hg17|chr7 (44032357-44032158) | |
| 454-632, gnl|loxAfr1|scaffold_14435 (6861-6322) | |
| 454-632, gnl|mm7|chr11 (5923312-5923781) | |
| 454-632, gnl|Mm7|chr11 (5923828-5923634) | |
| 454-632, gnl|monDom2|scaffold_1 (155872094-155871495) | |
| 454-632, gnl|panTro1|chr6_random (30920983-30920471) | |
| 454-632, gnl|rheMac2|chr3 (82117558-82117053) | |
| 454-632, gnl|rn3|chr14 (86653455-86653934) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |