Non-Coding RNA Search

Ss1.1-Pig4-TMW8063H03.3

Sequence:


               
               TCTTCTATAAGACAATCTGCTTAAAATAGCTTTAATGAACATATAAATCCAAACCACTGC
TCGATGAGACCGTCAGAGGCCACGCCACTAACAGACTCTGCCCCAGAATTCTACTAGGGA
AGCTGATGGCATAGGAAGGGCACTGCTGAGACCCAATACCTCCAAAACAAAAACATTACT
ACCTTTAAAAAAAAAAAAATGAAAGCCTGTTTACCATTAGGTATGCTCTGAAGGCCCCAA
CTGAAACATGCTGCATCAGATAAAGGGAAAGCTTGGTTCATTCCTAAAATCCAGTCTTCA
GAACATCACTGTCCAGCCTGGCTCACAGGGCCCAAGAGTCCTCAGAGGTCATTCTAGGGG
ACCCGCAGGCTGAGCCGAGGAGTGCCCACGCACCTTGGCCAGGTGGCCAGGCTGTCCAGG
TGCGTCTCTCACAGACTTGTCTCCTCACACACTCGGACGGGGATGTTGTAGTGCCGATCG
TCCTCGGCGATCAGGGTCACCACCGGCCAGTCCCTGGGTGGGTCGGTGGGATAGATGGTA
ATGAACTCCTCGGTGCTGTACTTGGAGAGCCGGTACACCTGGATGGTGTGGCGCACGGCG
TAGGCCAGAAGGAACATTTCAACCTGTTCAAGGCCACCAGTGTGTCCCACCTGGTTTAGA
TGGTTCCTCAGCAGCTGTCCAGGGTCATTTGATGTATCCCGAGCAAACAGAAGCACAGAG
AAAAATGGTACATCCTTTCCCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTCTATAAGACAATCTGCTTAAAATAGCTTTAATGAACATATAAATCCAAACCACTGC
TCGATGAGACCGTCAGAGGCCACGCCACTAACAGACTCTGCCCCAGAATTCTACTAGGGA
AGCTGATGGCATAGGAAGGGCACTGCTGAGACCCAATACCTCCAAAACAAAAACATTACT
ACCTTTAAAAAAAAAAAAATGAAAGCCTGTTTACCATTAGGTATGCTCTGAAGGCCCCAA
CTGAAACATGCTGCATCAGATAAAGGGAAAGCTTGGTTCATTCCTAAAATCCAGTCTTCA
GAACATCACTGTCCAGCCTGGCTCACAGGGCCCAAGAGTCCTCAGAGGTCATTCTAGGGG
ACCCGCAGGCTGAGCCGAGGAGTGCCCACGCACCTTGGCCAGGTGGCCAGGCTGTCCAGG
TGCGTCTCTCACAGACTTGTCTCCTCACACACTCGGACGGGGATGTTGTAGTGCCGATCG
TCCTCGGCGATCAGGGTCACCACCGGCCAGTCCCTGGGTGGGTCGGTGGGATAGATGGTA
ATGAACTCCTCGGTGCTGTACTTGGAGAGCCGGTACACCTGGATGGTGTGGCGCACGGCG
TAGGCCAGAAGGAACATTTCAACCTGTTCAAGGCCACCAGTGTGTCCCACCTGGTTTAGA
TGGTTCCTCAGCAGCTGTCCAGGGTCATTTGATGTATCCCGAGCAAACAGAAGCACAGAG
AAAAATGGTACATCCTTTCCCTTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|20306493|gb|AAH28541.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|20306493|gb|AAH28541.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               219-626, gnl|bosTau2|chr5 (60409550-60409975)
               

               
               219-626, gnl|Hg17|chr5 (14746391-14745960)
               

               
               219-626, gnl|Mm7|chr15 (27709164-27709588)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               219-626, gnl|bosTau2|chr5 (60409550-60409975)
               

               
               219-626, gnl|Hg17|chr5 (14746391-14745960)
               

               
               219-626, gnl|Mm7|chr15 (27709164-27709588)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cki (0.165235)
               

               
               lin (0.145603)
               

               
               nca (0.136874)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               lin (0.145603)
               

               
               nca (0.136874)

	219-626, gnl\|bosTau2\|chr5 (60409550-60409975)
	219-626, gnl\|Hg17\|chr5 (14746391-14745960)
	219-626, gnl\|Mm7\|chr15 (27709164-27709588)