Ss1.1-Pig4-TMW8063O05.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATCATGGGCCCCAAAATCATAAGGCTCATCTAGAAAAGCTTCTGCAGTACTGTGAAGCT GGAGTGAAAGAGGGGGCCACCTTGGTGTATGGAGGAAGGCAAGTGCAAAGGCCAGGCTTT TTTATGGAACCTACGGTCTTCACAGATGTGGAAGATCACATGTATCTTGCCAAAGAGGAG TCCTTCGGCCCCATTATGGTCATTTCTAAATTCCGAAATGGGGACATCGATGGAGTGTTG GAGCGAGCAAATAATACCGAGTACGGCTTGGCCTCAGGCGTTTTTACACGAGACATAAAT AAAGCCATGTATGTGAGTGAAAAACTGGAGGCAGGAACTGTTTTTATTAACACCTACAAC AAGACGGATGTGGCGGCCCCTTTTGGTGGATTTAAGCAGTCTGGTTTTGGAAAAGACTTA GGTGAGGAAGCTCTAAATGAATACCTCAGAACCAAGACAGTGACGCTGGAATATTAGAGC AGTCTGCCATCAGGAACCCCTCACAGACTGCACCGATCCTCAGCCCCCCACACTGAAGAA GCCTGGGCGTGCTGAGGGAAGAGGTACCAGCCACCAGCTGAAAAATCCACACACGGACCA TGAAGATAGGCCACAGGTCTAAGCATTTACACATGCGCCTCATTTTCTAATACCGCTTGT ATACCTTAAAATGATTTGTTGGGTTTTGACTATTGTTGTATTCCCATACATGTTTCTAAA ATACCAGGCTCCTTTTTATTTTTTTCCCCCACCAAGACTAACCTGGTCATGGTTGCTCAT CTTGAAAGCATCAATACCAGGCAGTTCTCACACAGAAGGTGCATTTTTGGGAACCCTCAT ATAATATACACAGGTTTTAACCTCTGAACGAGGCATATAGGGTTATTAAAAAGATTTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATCATGGGCCCCAAAATCATAAGGCTCATCTAGAAAAGCTTCTGCAGTACTGTGAAGCT GGAGTGAAAGAGGGGGCCACCTTGGTGTATGGAGGAAGGCAAGTGCAAAGGCCAGGCTTT TTTATGGAACCTACGGTCTTCACAGATGTGGAAGATCACATGTATCTTGCCAAAGAGGAG TCCTTCGGCCCCATTATGGTCATTTCTAAATTCCGAAATGGGGACATCGATGGAGTGTTG GAGCGAGCAAATAATACCGAGTACGGCTTGGCCTCAGGCGTTTTTACACGAGACATAAAT AAAGCCATGTATGTGAGTGAAAAACTGGAGGCAGGAACTGTTTTTATTAACACCTACAAC AAGACGGATGTGGCGGCCCCTTTTGGTGGATTTAAGCAGTCTGGTTTTGGAAAAGACTTA GGTGAGGAAGCTCTAAATGAATACCTCAGAACCAAGACAGTGACGCTGGAATATTAGAGC AGTCTGCCATCAGGAACCCCTCACAGACTGCACCGATCCTCAGCCCCCCACACTGAAGAA GCCTGGGCGTGCTGAGGGAAGAGGTACCAGCCACCAGCTGAAAAATCCACACACGGACCA TGAAGATAGGCCACAGGTCTAAGCATTTACACATGCGCCTCATTTTCTAATACCGCTTGT ATACCTTAAAATGATTTGTTGGGTTTTGACTATTGTTGTATTCCCATACATGTTTCTAAA ATACCAGGCTCCTTTTTATTTTTTTCCCCCACCAAGACTAACCTGGTCATGGTTGCTCAT CTTGAAAGCATCAATACCAGGCAGTTCTCACACAGAAGGTGCATTTTTGGGAACCCTCAT ATAATATACACAGGTTTTAACCTCTGAACGAGGCATATAGGGTTATTAAAAAGATTTTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-116, gnl|bosTau2|chr5 (64698666-64698781) | |
| 1-116, gnl|canFam2|chr10 (36482756-36482561) | |
| 1-116, gnl|danRer3|chr2 (45008225-45008040) | |
| 1-116, gnl|dasNov1|scaffold_15440 (29809-30004) | |
| 1-116, gnl|echTel1|scaffold_246603 (5372-5176) | |
| 1-116, gnl|fr1|chrUn (245637210-245637022) | |
| 1-116, gnl|galGal2|chr1 (51027284-51027103) | |
| 1-116, gnl|hg17|chr12 (103927992-103928187) | |
| 1-116, gnl|Hg17|chr12 (103928128-103928013) | |
| 1-116, gnl|loxAfr1|scaffold_11671 (41923-42119) | |
| 1-116, gnl|mm7|chr10 (83037356-83037555) | |
| 1-116, gnl|Mm7|chr10 (83037492-83037377) | |
| 1-116, gnl|monDom2|scaffold_34 (8226425-8226234) | |
| 1-116, gnl|oryCun1|scaffold_172451 (22111-22306) | |
| 1-116, gnl|panTro1|chr10 (106414651-106414846) | |
| 1-116, gnl|rheMac2|chr11 (106153089-106153284) | |
| 1-116, gnl|rn3|chr7 (22464428-22464228) | |
| 1-116, gnl|tetNig1|chrUn_random (48675987-48675812) | |
| 1-116, gnl|xenTro1|scaffold_434 (736431-736606) | |
| 419-900, gnl|bosTau2|chr5 (64705543-64706014) | |
| 419-900, gnl|Hg17|chr12 (103920727-103920254) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-116, gnl|bosTau2|chr5 (64698666-64698781) | |
| 1-116, gnl|canFam2|chr10 (36482756-36482561) | |
| 1-116, gnl|danRer3|chr2 (45008225-45008040) | |
| 1-116, gnl|dasNov1|scaffold_15440 (29809-30004) | |
| 1-116, gnl|echTel1|scaffold_246603 (5372-5176) | |
| 1-116, gnl|fr1|chrUn (245637210-245637022) | |
| 1-116, gnl|galGal2|chr1 (51027284-51027103) | |
| 1-116, gnl|hg17|chr12 (103927992-103928187) | |
| 1-116, gnl|Hg17|chr12 (103928128-103928013) | |
| 1-116, gnl|loxAfr1|scaffold_11671 (41923-42119) | |
| 1-116, gnl|mm7|chr10 (83037356-83037555) | |
| 1-116, gnl|Mm7|chr10 (83037492-83037377) | |
| 1-116, gnl|monDom2|scaffold_34 (8226425-8226234) | |
| 1-116, gnl|oryCun1|scaffold_172451 (22111-22306) | |
| 1-116, gnl|panTro1|chr10 (106414651-106414846) | |
| 1-116, gnl|rheMac2|chr11 (106153089-106153284) | |
| 1-116, gnl|rn3|chr7 (22464428-22464228) | |
| 1-116, gnl|tetNig1|chrUn_random (48675987-48675812) | |
| 1-116, gnl|xenTro1|scaffold_434 (736431-736606) | |
| 419-900, gnl|bosTau2|chr5 (64705543-64706014) | |
| 419-900, gnl|Hg17|chr12 (103920727-103920254) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sin (0.174948) | |
| tbr (0.154178) |