Non-Coding RNA Search

Ss1.1-Pig4-TMW8063P13.5

Sequence:


               
               TTCACTTCTGCCTTCCATCTCTACAAGAAACAGCAGGGAAACGCAGAGCCAAGAGCCCAA
ACCCCTCCGTTCTGAGGCAGAATGCCCGCACCCGTTCTCAGCTGTCATTAGTACCAGTGA
AAAGGAGACCATCAAGACTGCGCTGTCCCAGGTGTGTGGAGAGCGAGTATTCCGGGCAGC
GGGGGCAGGTTACAAGAGCCTCTGTGTTGTCCTTGGCCTTGTAGACATTTACATCTTCTC
AGAAGATACCACGTTCAAGTGGGACTCTTGTGCTGCTCACGCCATCCTCAGGGCCATGGG
TGGGGGAATGGTGGACTTGAAAGAATGCCTGGAAAGAAATCCCGATACAGGGCTTGACTT
GCCACAGTTGGTGTACCACGTGGGAAACGAAGGTGCTGCTGGAGTGGATCAGTGGGCCAA
CAAGGGAGGTCTAATTGCATACAGATCAAAGAAGCAGCTGGAGGGGTTCCTGAGCCGCCT
CTTCCAGTACCTGGGCCCTGCAGATGCATACACGTAGATGAGCTCTGCCTCCTGTACTCG
AAACCCAACTGTGAACCTCGTTTCCACATCTCCATCTTTTGAAGACCACTTTGTCCTACT
GATGGTCAACATTCACCTGCCTCTTTTGAGGAGAATTTTTCCATGATATGTTCATAATGT
TAATGTCAATAAATGAATGATATTCATGAAGCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCACTTCTGCCTTCCATCTCTACAAGAAACAGCAGGGAAACGCAGAGCCAAGAGCCCAA
ACCCCTCCGTTCTGAGGCAGAATGCCCGCACCCGTTCTCAGCTGTCATTAGTACCAGTGA
AAAGGAGACCATCAAGACTGCGCTGTCCCAGGTGTGTGGAGAGCGAGTATTCCGGGCAGC
GGGGGCAGGTTACAAGAGCCTCTGTGTTGTCCTTGGCCTTGTAGACATTTACATCTTCTC
AGAAGATACCACGTTCAAGTGGGACTCTTGTGCTGCTCACGCCATCCTCAGGGCCATGGG
TGGGGGAATGGTGGACTTGAAAGAATGCCTGGAAAGAAATCCCGATACAGGGCTTGACTT
GCCACAGTTGGTGTACCACGTGGGAAACGAAGGTGCTGCTGGAGTGGATCAGTGGGCCAA
CAAGGGAGGTCTAATTGCATACAGATCAAAGAAGCAGCTGGAGGGGTTCCTGAGCCGCCT
CTTCCAGTACCTGGGCCCTGCAGATGCATACACGTAGATGAGCTCTGCCTCCTGTACTCG
AAACCCAACTGTGAACCTCGTTTCCACATCTCCATCTTTTGAAGACCACTTTGTCCTACT
GATGGTCAACATTCACCTGCCTCTTTTGAGGAGAATTTTTCCATGATATGTTCATAATGT
TAATGTCAATAAATGAATGATATTCATGAAGCAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-405, gnl|bosTau2|chr1 (16759605-16760008)
               

               
               1-405, gnl|Hg17|chr2 (191061132-191061522)
               

               
               1-405, gnl|Mm7|chr1 (53023683-53023302)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-405, gnl|bosTau2|chr1 (16759605-16760008)
               

               
               1-405, gnl|Hg17|chr2 (191061132-191061522)
               

               
               1-405, gnl|Mm7|chr1 (53023683-53023302)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nlu (0.191681)
               

               
               cut (0.169924)
               

               
               cje (0.165235)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)
               

               
               cut (0.169924)
               

               
               cje (0.165235)

	1-405, gnl\|bosTau2\|chr1 (16759605-16760008)
	1-405, gnl\|Hg17\|chr2 (191061132-191061522)
	1-405, gnl\|Mm7\|chr1 (53023683-53023302)