Ss1.1-Pig4-TMW8064A21.5
|
GAGGTCGATAAGCTTGAACTGATGGAAAATAACAAGATTAAGTAAAGAAGCCATCTCCAT
CGCAGTCCTTTCCTCCTACCACTGCCATTCCCTGGCATTACTGCTCAGGTATCATTGTGC
CTTTGCTGCTTCCTTCAAGATGAACCTTGGGTCTCTAATCCTACCAAGTAGCTGAAGTGG
ACATTTAAAGGAAGATTGGTGAAAATAATGGAAAGTGTTTTCGCATCAATCAACATTATT
AATGGAGGAATAAGCTCATTTTCCAGAAAGCTGACTCTGATCTGGATTACATTCAGTACA
GGCTGGAATATGAAATCAAGACAAATTATCCTGATTCAGCAGGCAAGAAAAATCCAGTTA
CACTCTTAAAAGAATTGTCAGCAATAAAGTCTCGATATCACGGTTTGCATACACGCTTTA
AACCAATTGCTGCTGAGCAGAAAGAGACCAAGAGCCGCATTTGTGCTACTTTCAATAAGA
CTATGACCTTGATACGAGAACTACAAAAGCAAACGGACCTGGAGCTATTACCACTGACGG
AAGAAGAGAAAACTGCGGCAGAGCAATTAAAAGCGCACATGTCAGATTTATGAAGAAATG
GACTTGCAAAAGGAAACTCTAATGGTGAAGAGATCCCTTCCAGAGGGATCTAGGAAGATG
TCTTGTTAGCATTTGATGACTACTGGTGGGGGGATGGCAAAGAAGATTTGGCTTGGGTGA
TTGGTTAGTGATGCCTTCTGCAAAAAACAGGAATATAGGAAGGGCAGATACTATCAAAGT
TCAGCCAAAAGGATGGGATGAAAATAAAAAGATTAAAAAATATATGCACACACACACACA
CACTTGTTATTTCAGGAAAGGAAGTCTCAACACCATTTTGTATTTATTTTTGTATAATCA
GGATAACATAGATGTCCTAGCCTATTATAAAAGTATATTCATGTACTGTCAGTCAGTCAA
ATGAGACTGAACATGCTTTGGAAATTAAAGGATAGAAAAAATATTTGTATCATATATATG
TATAGAATTTTATAATTAAAAATTCTGATTACAGAGGTGGTCACATTATTGATGAGATTG
CTAATAAACAGTCTCCTGCCATAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAGGTCGATAAGCTTGAACTGATGGAAAATAACAAGATTAAGTAAAGAAGCCATCTCCAT
CGCAGTCCTTTCCTCCTACCACTGCCATTCCCTGGCATTACTGCTCAGGTATCATTGTGC
CTTTGCTGCTTCCTTCAAGATGAACCTTGGGTCTCTAATCCTACCAAGTAGCTGAAGTGG
ACATTTAAAGGAAGATTGGTGAAAATAATGGAAAGTGTTTTCGCATCAATCAACATTATT
AATGGAGGAATAAGCTCATTTTCCAGAAAGCTGACTCTGATCTGGATTACATTCAGTACA
GGCTGGAATATGAAATCAAGACAAATTATCCTGATTCAGCAGGCAAGAAAAATCCAGTTA
CACTCTTAAAAGAATTGTCAGCAATAAAGTCTCGATATCACGGTTTGCATACACGCTTTA
AACCAATTGCTGCTGAGCAGAAAGAGACCAAGAGCCGCATTTGTGCTACTTTCAATAAGA
CTATGACCTTGATACGAGAACTACAAAAGCAAACGGACCTGGAGCTATTACCACTGACGG
AAGAAGAGAAAACTGCGGCAGAGCAATTAAAAGCGCACATGTCAGATTTATGAAGAAATG
GACTTGCAAAAGGAAACTCTAATGGTGAAGAGATCCCTTCCAGAGGGATCTAGGAAGATG
TCTTGTTAGCATTTGATGACTACTGGTGGGGGGATGGCAAAGAAGATTTGGCTTGGGTGA
TTGGTTAGTGATGCCTTCTGCAAAAAACAGGAATATAGGAAGGGCAGATACTATCAAAGT
TCAGCCAAAAGGATGGGATGAAAATAAAAAGATTAAAAAATATATGCACACACACACACA
CACTTGTTATTTCAGGAAAGGAAGTCTCAACACCATTTTGTATTTATTTTTGTATAATCA
GGATAACATAGATGTCCTAGCCTATTATAAAAGTATATTCATGTACTGTCAGTCAGTCAA
ATGAGACTGAACATGCTTTGGAAATTAAAGGATAGAAAAAATATTTGTATCATATATATG
TATAGAATTTTATAATTAAAAATTCTGATTACAGAGGTGGTCACATTATTGATGAGATTG
CTAATAAACAGTCTCCTGCCATAC
|
|
gi|61825267|ref|XP_590893.1| |
Protein identifier
|
gi|61825267|ref|XP_590893.1| |
|
146-260, gnl|bosTau2|chr19 (4466123-4466010) |
|
146-260, gnl|canFam2|chr9 (37048017-37048168) |
|
146-260, gnl|dasNov1|scaffold_6429 (57310-57009) |
|
146-260, gnl|echTel1|scaffold_323493 (66905-67068) |
|
146-260, gnl|hg17|chr17 (54584337-54584503) |
|
146-260, gnl|Hg17|chr17 (54584491-54584373) |
|
146-260, gnl|mm7|chr11 (87181668-87181504) |
|
146-260, gnl|Mm7|chr11 (87181512-87181631) |
|
146-260, gnl|monDom2|scaffold_56 (3549519-3549299) |
|
146-260, gnl|oryCun1|scaffold_211061 (45141-44976) |
|
146-260, gnl|panTro1|chr19_random (40330046-40330212) |
|
146-260, gnl|rheMac2|chr16 (43396667-43396835) |
|
146-260, gnl|rn3|chr10 (75399933-75399779) |
| |
|
523-767, gnl|bosTau2|chr19 (4438739-4438493) |
|
523-767, gnl|Hg17|chr17 (54544490-54544247) |
|
523-767, gnl|Mm7|chr11 (87191840-87192086) |
| |
|
798-1086, gnl|bosTau2|chr19 (4438487-4438202) |
|
798-1086, gnl|Hg17|chr17 (54544211-54543918) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
146-260, gnl|bosTau2|chr19 (4466123-4466010) |
|
146-260, gnl|canFam2|chr9 (37048017-37048168) |
|
146-260, gnl|dasNov1|scaffold_6429 (57310-57009) |
|
146-260, gnl|echTel1|scaffold_323493 (66905-67068) |
|
146-260, gnl|hg17|chr17 (54584337-54584503) |
|
146-260, gnl|Hg17|chr17 (54584491-54584373) |
|
146-260, gnl|mm7|chr11 (87181668-87181504) |
|
146-260, gnl|Mm7|chr11 (87181512-87181631) |
|
146-260, gnl|monDom2|scaffold_56 (3549519-3549299) |
|
146-260, gnl|oryCun1|scaffold_211061 (45141-44976) |
|
146-260, gnl|panTro1|chr19_random (40330046-40330212) |
|
146-260, gnl|rheMac2|chr16 (43396667-43396835) |
|
146-260, gnl|rn3|chr10 (75399933-75399779) |
| |
|
523-767, gnl|bosTau2|chr19 (4438739-4438493) |
|
523-767, gnl|Hg17|chr17 (54544490-54544247) |
|
523-767, gnl|Mm7|chr11 (87191840-87192086) |
| |
|
798-1086, gnl|bosTau2|chr19 (4438487-4438202) |
|
798-1086, gnl|Hg17|chr17 (54544211-54543918) |
|
pla (0.401016) |
|
fty (0.351679) |
|
tes (0.207814) |
|
col (0.195008) |
|
rec (0.17307) |
|
hlv (0.139256) |
|
kid (0.129735) |
|
ova (0.129132) |
|
thg (0.126791) |
|
ese (0.126502) |
|
bla (0.124347) |
|
med (0.116252) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
pla (0.401016) |
|
fty (0.351679) |
|
tes (0.207814) |
|
col (0.195008) |
|
rec (0.17307) |
|
hlv (0.139256) |
|
kid (0.129735) |
|
ova (0.129132) |
|
thg (0.126791) |
|
ese (0.126502) |
|
bla (0.124347) |
|
med (0.116252) |
|
cty (0.10408) |
|
nbm (0.0993246) |
