Ss1.1-Pig4-TMW8064H06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCTTGGCCCATGGCTTTCCCTTACCAGTATCCGCCGCCCCCACACCCCTACAATCCGCA CCCAGGCTTCCCAGAGCTGGGGTACAGCTATGGCGGGGGCAGCGCCAGCAGTCAGCACAG TGAAGGCAGCCGGAGCAGTGGCTCCAACCGCAGCGGCAGCGACCGGCGGAAGGAGAAAGA CCAGAAGGCCGGGGACTCAAAGTCGGGTGGCAGCGGCAGCGAGTCGGACCACACGACCCG CAGCAGCCTGCGGGGGCCTCGGGAACGCGCGCCCAGCGAGCGCTCGGGCCCTGCCACCAG CGAGCACAGCCACCGCAGCCACCACTCGCTGGCCAGCAGCCTGCGCAGCCATCACACACA TCCGAGCTACGGCCCCCCCGGCGTGCCCCCTCTCTACGGCCCCCCCATGCTGATGATGCC CCCACCGCCTGCGGCCATGGGGCCCCCGGGAGCCCCTCCGGGCCGCGACCTGGCCTCCGT GCCCCCTGAACTGACCGCCAGCAGACAGTCCTTCCGCATGGCCATGGGAAACCCCAGTGA GTTCTTTGTGGATGTGATGTGAGAGGGCCCCTCCCCCATTTCCATCCCATCCTGCCCGGG CCGCCTGCATCCCTCTCTCAGTCCGTCTTTTTTACTTTGTCTGGTACCTGAAAGGGAAAT AAACGGAACTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCTTGGCCCATGGCTTTCCCTTACCAGTATCCGCCGCCCCCACACCCCTACAATCCGCA CCCAGGCTTCCCAGAGCTGGGGTACAGCTATGGCGGGGGCAGCGCCAGCAGTCAGCACAG TGAAGGCAGCCGGAGCAGTGGCTCCAACCGCAGCGGCAGCGACCGGCGGAAGGAGAAAGA CCAGAAGGCCGGGGACTCAAAGTCGGGTGGCAGCGGCAGCGAGTCGGACCACACGACCCG CAGCAGCCTGCGGGGGCCTCGGGAACGCGCGCCCAGCGAGCGCTCGGGCCCTGCCACCAG CGAGCACAGCCACCGCAGCCACCACTCGCTGGCCAGCAGCCTGCGCAGCCATCACACACA TCCGAGCTACGGCCCCCCCGGCGTGCCCCCTCTCTACGGCCCCCCCATGCTGATGATGCC CCCACCGCCTGCGGCCATGGGGCCCCCGGGAGCCCCTCCGGGCCGCGACCTGGCCTCCGT GCCCCCTGAACTGACCGCCAGCAGACAGTCCTTCCGCATGGCCATGGGAAACCCCAGTGA GTTCTTTGTGGATGTGATGTGAGAGGGCCCCTCCCCCATTTCCATCCCATCCTGCCCGGG CCGCCTGCATCCCTCTCTCAGTCCGTCTTTTTTACTTTGTCTGGTACCTGAAAGGGAAAT AAACGGAACTAA |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 1-126, gnl|bosTau2|chr1 (51277263-51277138) | |
| 1-126, gnl|canFam2|chr34 (20074357-20074513) | |
| 1-126, gnl|canFam2|chr5 (35192084-35192209) | |
| 1-126, gnl|danRer3|chr18 (34891839-34891983) | |
| 1-126, gnl|danRer3|chr7 (51710521-51710396) | |
| 1-126, gnl|dasNov1|scaffold_95197 (1829-1711) | |
| 1-126, gnl|dasNov1|scaffold_95197 (1719-1869) | |
| 1-126, gnl|echTel1|scaffold_273817 (786-630) | |
| 1-126, gnl|echTel1|scaffold_306143 (554-429) | |
| 1-126, gnl|fr1|chrUn (11463623-11463754) | |
| 1-126, gnl|fr1|chrUn (74769307-74769175) | |
| 1-126, gnl|galGal2|chr9 (15164438-15164319) | |
| 1-126, gnl|galGal2|chr9 (15164327-15164476) | |
| 1-126, gnl|hg17|chr17 (7070498-7070623) | |
| 1-126, gnl|hg17|chr3 (185370565-185370721) | |
| 1-126, gnl|Hg17|chr3 (185370587-185370712) | |
| 1-126, gnl|loxAfr1|scaffold_44629 (15104-14990) | |
| 1-126, gnl|loxAfr1|scaffold_44629 (14990-15146) | |
| 1-126, gnl|mm7|chr11 (70090537-70090412) | |
| 1-126, gnl|mm7|chr16 (20080867-20081023) | |
| 1-126, gnl|Mm7|chr16 (20080889-20081014) | |
| 1-126, gnl|monDom2|scaffold_167 (1462337-1462501) | |
| 1-126, gnl|monDom2|scaffold_66 (4114053-4114178) | |
| 1-126, gnl|oryCun1|scaffold_174838 (72865-73015) | |
| 1-126, gnl|oryCun1|scaffold_188687 (2009-1884) | |
| 1-126, gnl|panTro1|chr19_random (44682877-44682752) | |
| 1-126, gnl|panTro1|chr2 (189321017-189321173) | |
| 1-126, gnl|rheMac2|chr16 (6955871-6955996) | |
| 1-126, gnl|rheMac2|chr2 (102500181-102500025) | |
| 1-126, gnl|rn3|chr10 (56868660-56868535) | |
| 1-126, gnl|rn3|chr11 (82656033-82655877) | |
| 1-126, gnl|tetNig1|chr15 (4200456-4200588) | |
| 1-126, gnl|tetNig1|chrUn_random (46737129-46736998) | |
| 1-126, gnl|xenTro1|scaffold_1159 (272869-273000) | |
| 1-126, gnl|xenTro1|scaffold_244 (30833-30981) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-126, gnl|bosTau2|chr1 (51277263-51277138) | |
| 1-126, gnl|canFam2|chr34 (20074357-20074513) | |
| 1-126, gnl|canFam2|chr5 (35192084-35192209) | |
| 1-126, gnl|danRer3|chr18 (34891839-34891983) | |
| 1-126, gnl|danRer3|chr7 (51710521-51710396) | |
| 1-126, gnl|dasNov1|scaffold_95197 (1829-1711) | |
| 1-126, gnl|dasNov1|scaffold_95197 (1719-1869) | |
| 1-126, gnl|echTel1|scaffold_273817 (786-630) | |
| 1-126, gnl|echTel1|scaffold_306143 (554-429) | |
| 1-126, gnl|fr1|chrUn (11463623-11463754) | |
| 1-126, gnl|fr1|chrUn (74769307-74769175) | |
| 1-126, gnl|galGal2|chr9 (15164438-15164319) | |
| 1-126, gnl|galGal2|chr9 (15164327-15164476) | |
| 1-126, gnl|hg17|chr17 (7070498-7070623) | |
| 1-126, gnl|hg17|chr3 (185370565-185370721) | |
| 1-126, gnl|Hg17|chr3 (185370587-185370712) | |
| 1-126, gnl|loxAfr1|scaffold_44629 (15104-14990) | |
| 1-126, gnl|loxAfr1|scaffold_44629 (14990-15146) | |
| 1-126, gnl|mm7|chr11 (70090537-70090412) | |
| 1-126, gnl|mm7|chr16 (20080867-20081023) | |
| 1-126, gnl|Mm7|chr16 (20080889-20081014) | |
| 1-126, gnl|monDom2|scaffold_167 (1462337-1462501) | |
| 1-126, gnl|monDom2|scaffold_66 (4114053-4114178) | |
| 1-126, gnl|oryCun1|scaffold_174838 (72865-73015) | |
| 1-126, gnl|oryCun1|scaffold_188687 (2009-1884) | |
| 1-126, gnl|panTro1|chr19_random (44682877-44682752) | |
| 1-126, gnl|panTro1|chr2 (189321017-189321173) | |
| 1-126, gnl|rheMac2|chr16 (6955871-6955996) | |
| 1-126, gnl|rheMac2|chr2 (102500181-102500025) | |
| 1-126, gnl|rn3|chr10 (56868660-56868535) | |
| 1-126, gnl|rn3|chr11 (82656033-82655877) | |
| 1-126, gnl|tetNig1|chr15 (4200456-4200588) | |
| 1-126, gnl|tetNig1|chrUn_random (46737129-46736998) | |
| 1-126, gnl|xenTro1|scaffold_1159 (272869-273000) | |
| 1-126, gnl|xenTro1|scaffold_244 (30833-30981) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |