Ss1.1-Pig4-TMW8064L12.3
|
CTGCCCTCGCTGCCTCCAGCGAAGCCGCCGCTAGCCCGCGAGGACCACCGCCACCCCTGC
CCTACCGCTGCCGCCTGTGTCGCCGCCGCCTCGGGACCGGCTGTATGATTAAGCCACAAT
CTTCAATGAGTAGACATATTCCTCAGTTCTGTGGTGTTCTTGGTCACACATTTATGGAGT
TTCTGAAGGGCAGTGGAGATTACTGCCAGGCACAGCACGACCTTTATGCAGATGAGTGAA
CTGTAAAAACTCATTGCTACTCCACCAAGAAGCCCCCATAAGAGTGGTTAACCTGGACAC
AGAAGTGTTGAATTAAAATCCACAGAGCATTTTTTACAAGAGTTCTGACCTGGATGGGGT
AAACCTCAGTGCACTTCCTTTCTATTGCCTCAGTATTACTGGATTGAAAAGTTGCTGCTT
CTTTTTAGGAGGTTCATTTCATTTCCCATTACTCCCAACTTCATACTCAGAAGCACTGAG
AATTTCAAGTGGAGTATATTGAAGTAGACTCAGTTTCTTTGCATCATTTCTGTATTGAGT
TTTTAAAATTTTTTCATAACCCTATTGAGTTTTTTTAACTAAATTAACATGGCTCGAATG
AACCGCCCAGCTCCTGTGGAAGTCACATACAAGAACATGAGATTTCTTATTACACACAAT
CCAACTAATGCAACCTTAAACAAATTTATAGAGGAACTTAAGAAGTATGGAGTTACCACA
ATAGTAAGAGTATGTGAAGCAACCTATGATACTACTCTTGTGGAGAAGGAAGGCATCCAT
GTTCTCGATTGGCCTTTTGATGATGGTGCACCACCATCTAACCAGATTGTTGATGACTGG
TTAAGTCTTGTGAAAATTAAGTTTCGTGAAGATCCTGGTTGTTGTATTGCTGTTCATTGT
GTTGCAGGACTTGGGAGAGCTCCAGTGCTTGTTGCCCTAGCATTAATTGAAGGTGGAATG
AAATATGAAGATGCAGTACAGTTCATAAGACAAAAGCGGCGTGGAGCTTTTAACAGCAAA
CAACTTTTGTATTTAGAGAAGTATCGTCCTAAAATGCGGCTGCGCTTCAAAGACTCTAAT
GGTCATAGAAACAACTGTTGCATTCAATAACATTGAGATGCCTGATGTCATTGTTTGGAA
GTGGAACTTGAGACGTGGCTGAATTTGTCGTACATATTAGCCAACACATTGGCTTGGTGA
ATATGTTTAATGAAGCTTCCATAGGAGTGTTGGAAAGCAGTTTCACCAGGCCACAAGCCT
GGTAGAATTTGCAACCTCTATGTTTGAGTTATGATCAACCTATTTGGACATTTAGCAGAG
GGTTCTTGCTGTTCAGCATTTAAAATGTGCTTAGCATTTGTACCAATTGACCTTTCCTGA
AATCATGCAGTATTGAGTTAACATCTTCAAATCTGTTTCCATGCCACAATCTTATCAATA
AGAAATTTAGAAAGACTAGGTGCCAAAATACCCAGCACAATACTTGTATATTTTTAGTGT
CATATAGAACTAAAATCCCAGGAACTATGAACACTCTGGACCTTATGTGGTTTATTTCTT
CCATCATTTCAGACATAAAAAGTTGGGCCTATGTGGTTATTTGTTCACAGGATGTTTACA
TCTCCCACATTCATACCAGTATACATCAAGATTTGCTTTTTTTCCTTTTTATTAACCAAG
TCTTAAAGTGATTATTTAATGTTTTTCTGTAAACCTCATTTTGTGCTGTCATAAAAGACC
TCCATTTTGAAAATCTACATTGTACAGAAGCACACGTCTTTAATGTCTCCAGACAAAAAA
AGCCTTACAGTTAATTTTAATGTTTGCACTTTGGGGTGCAACTTACAGGGAGGGCCTGCA
AAAAGAGTGGGAGGGGGCTATTAAGTATTTTTAGTAAAATGTTGCCTTTGTCTTGTGCAG
AACATGTAGAATATGCGCTTTAATTTAGTAAATATTTTTTTAAAAGGTAGAAATACTTTG
TTATTGTAGCTAAAACAATTCTTAATCATAAAATTTCTGAAATTGTAATTTTTTTTCATA
CTTATCTGAAGTTGTTTACCAACTTATTTTTGTTTGAAGTGTGGTTCCCAACCTCTCTTG
CAAAAAAAAAAAGAAGTGGGTTTCTGCTAATGAATTGAGCAGACATTTAATATTTTATAT
GCCTTTTGAGCTGTGTAACTTAATATTTGGATACTTGACAATTTGTTTTATTATGTAATT
GATAAAATGGTGATGTGTATTAACGTTAGCTCAACCATATATTTATACTGTCCGGGAACA
TGTGGTTATAGTTCTGTGGGAGAAATAATTTGTCAGTGTTCACCAGCTTGTAAAAATTTA
GTGCGAGAGCTTAAACATTAAATAAATAATGAAATGCATCTATCATCATTGAAATTGTTT
TGCTTAAAGTTAACTTATTTTGTAAAAATATGAAAGAATTGCATTTCACTTAGTGCCATT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGCCCTCGCTGCCTCCAGCGAAGCCGCCGCTAGCCCGCGAGGACCACCGCCACCCCTGC
CCTACCGCTGCCGCCTGTGTCGCCGCCGCCTCGGGACCGGCTGTATGATTAAGCCACAAT
CTTCAATGAGTAGACATATTCCTCAGTTCTGTGGTGTTCTTGGTCACACATTTATGGAGT
TTCTGAAGGGCAGTGGAGATTACTGCCAGGCACAGCACGACCTTTATGCAGATGAGTGAA
CTGTAAAAACTCATTGCTACTCCACCAAGAAGCCCCCATAAGAGTGGTTAACCTGGACAC
AGAAGTGTTGAATTAAAATCCACAGAGCATTTTTTACAAGAGTTCTGACCTGGATGGGGT
AAACCTCAGTGCACTTCCTTTCTATTGCCTCAGTATTACTGGATTGAAAAGTTGCTGCTT
CTTTTTAGGAGGTTCATTTCATTTCCCATTACTCCCAACTTCATACTCAGAAGCACTGAG
AATTTCAAGTGGAGTATATTGAAGTAGACTCAGTTTCTTTGCATCATTTCTGTATTGAGT
TTTTAAAATTTTTTCATAACCCTATTGAGTTTTTTTAACTAAATTAACATGGCTCGAATG
AACCGCCCAGCTCCTGTGGAAGTCACATACAAGAACATGAGATTTCTTATTACACACAAT
CCAACTAATGCAACCTTAAACAAATTTATAGAGGAACTTAAGAAGTATGGAGTTACCACA
ATAGTAAGAGTATGTGAAGCAACCTATGATACTACTCTTGTGGAGAAGGAAGGCATCCAT
GTTCTCGATTGGCCTTTTGATGATGGTGCACCACCATCTAACCAGATTGTTGATGACTGG
TTAAGTCTTGTGAAAATTAAGTTTCGTGAAGATCCTGGTTGTTGTATTGCTGTTCATTGT
GTTGCAGGACTTGGGAGAGCTCCAGTGCTTGTTGCCCTAGCATTAATTGAAGGTGGAATG
AAATATGAAGATGCAGTACAGTTCATAAGACAAAAGCGGCGTGGAGCTTTTAACAGCAAA
CAACTTTTGTATTTAGAGAAGTATCGTCCTAAAATGCGGCTGCGCTTCAAAGACTCTAAT
GGTCATAGAAACAACTGTTGCATTCAATAACATTGAGATGCCTGATGTCATTGTTTGGAA
GTGGAACTTGAGACGTGGCTGAATTTGTCGTACATATTAGCCAACACATTGGCTTGGTGA
ATATGTTTAATGAAGCTTCCATAGGAGTGTTGGAAAGCAGTTTCACCAGGCCACAAGCCT
GGTAGAATTTGCAACCTCTATGTTTGAGTTATGATCAACCTATTTGGACATTTAGCAGAG
GGTTCTTGCTGTTCAGCATTTAAAATGTGCTTAGCATTTGTACCAATTGACCTTTCCTGA
AATCATGCAGTATTGAGTTAACATCTTCAAATCTGTTTCCATGCCACAATCTTATCAATA
AGAAATTTAGAAAGACTAGGTGCCAAAATACCCAGCACAATACTTGTATATTTTTAGTGT
CATATAGAACTAAAATCCCAGGAACTATGAACACTCTGGACCTTATGTGGTTTATTTCTT
CCATCATTTCAGACATAAAAAGTTGGGCCTATGTGGTTATTTGTTCACAGGATGTTTACA
TCTCCCACATTCATACCAGTATACATCAAGATTTGCTTTTTTTCCTTTTTATTAACCAAG
TCTTAAAGTGATTATTTAATGTTTTTCTGTAAACCTCATTTTGTGCTGTCATAAAAGACC
TCCATTTTGAAAATCTACATTGTACAGAAGCACACGTCTTTAATGTCTCCAGACAAAAAA
AGCCTTACAGTTAATTTTAATGTTTGCACTTTGGGGTGCAACTTACAGGGAGGGCCTGCA
AAAAGAGTGGGAGGGGGCTATTAAGTATTTTTAGTAAAATGTTGCCTTTGTCTTGTGCAG
AACATGTAGAATATGCGCTTTAATTTAGTAAATATTTTTTTAAAAGGTAGAAATACTTTG
TTATTGTAGCTAAAACAATTCTTAATCATAAAATTTCTGAAATTGTAATTTTTTTTCATA
CTTATCTGAAGTTGTTTACCAACTTATTTTTGTTTGAAGTGTGGTTCCCAACCTCTCTTG
CAAAAAAAAAAAGAAGTGGGTTTCTGCTAATGAATTGAGCAGACATTTAATATTTTATAT
GCCTTTTGAGCTGTGTAACTTAATATTTGGATACTTGACAATTTGTTTTATTATGTAATT
GATAAAATGGTGATGTGTATTAACGTTAGCTCAACCATATATTTATACTGTCCGGGAACA
TGTGGTTATAGTTCTGTGGGAGAAATAATTTGTCAGTGTTCACCAGCTTGTAAAAATTTA
GTGCGAGAGCTTAAACATTAAATAAATAATGAAATGCATCTATCATCATTGAAATTGTTT
TGCTTAAAGTTAACTTATTTTGTAAAAATATGAAAGAATTGCATTTCACTTAGTGCCATT |
|
gi|32967623|gb|AAH55039.1| |
Protein identifier
|
gi|32967623|gb|AAH55039.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
sin (0.69979) |
|
ute (0.663922) |
|
kid (0.518941) |
|
eye (0.511509) |
|
tra (0.492368) |
|
tbr (0.462535) |
|
spc (0.453463) |
|
lin (0.436808) |
|
tes (0.415628) |
|
col (0.390016) |
|
ova (0.387397) |
|
mgm (0.360685) |
|
nje (0.33184) |
|
mga (0.32041) |
|
lun (0.300978) |
|
liv (0.292569) |
|
nca (0.273748) |
|
pla (0.267344) |
|
lyg (0.266205) |
|
ret (0.257467) |
|
cbe (0.239234) |
|
med (0.232504) |
|
mgp (0.230681) |
|
cty (0.20816) |
|
hea (0.204499) |
|
fli (0.202881) |
|
fcc (0.197785) |
|
ldo (0.194005) |
|
cmu (0.186393) |
|
gul (0.177588) |
|
fbs (0.175346) |
|
fhi (0.169578) |
|
nco (0.161734) |
|
fco (0.157208) |
|
eli (0.151814) |
|
isp (0.150376) |
|
fat (0.147427) |
|
ski (0.146735) |
|
spl (0.143184) |
|
csk (0.140746) |
|
ste (0.135208) |
|
sug (0.127291) |
|
thg (0.126791) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
cbl (0.114797) |
|
jca (0.11396) |
|
jej (0.0989218) |
|
eje (0.0988338) |
|
sin (0.69979) |
|
ute (0.663922) |
|
kid (0.518941) |
|
eye (0.511509) |
|
tra (0.492368) |
|
tbr (0.462535) |
|
spc (0.453463) |
|
lin (0.436808) |
|
tes (0.415628) |
|
col (0.390016) |
|
ova (0.387397) |
|
mgm (0.360685) |
|
nje (0.33184) |
|
mga (0.32041) |
|
lun (0.300978) |
|
liv (0.292569) |
|
nca (0.273748) |
|
pla (0.267344) |
|
lyg (0.266205) |
|
ret (0.257467) |
|
cbe (0.239234) |
|
med (0.232504) |
|
mgp (0.230681) |
|
cty (0.20816) |
|
hea (0.204499) |
|
fli (0.202881) |
|
fcc (0.197785) |
|
ldo (0.194005) |
|
cmu (0.186393) |
|
gul (0.177588) |
|
fbs (0.175346) |
|
fhi (0.169578) |
|
nco (0.161734) |
|
fco (0.157208) |
|
eli (0.151814) |
|
isp (0.150376) |
|
fat (0.147427) |
|
ski (0.146735) |
|
spl (0.143184) |
|
csk (0.140746) |
|
ste (0.135208) |
|
sug (0.127291) |
|
thg (0.126791) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ebs (0.118301) |
|
ecc (0.115035) |
|
cbl (0.114797) |
|
jca (0.11396) |
|
jej (0.0989218) |
|
eje (0.0988338) |