Non-Coding RNA Search

Ss1.1-Pig4-TMW8064M24.3

Sequence:


               
               CGCCGACGTAGAGCAATGGCCGCGTCTGGGGAACCCGGGAGGCAGTGGCAGGAGCAGGTG
GCGGCGGCAGTGGTGGTGGTGGGCTCCTGCATGACCGACCTGGTCAGCCTTACTTCTCGT
TTGCCAAAAACTGGAGAAACCATCCATGGACAGAAGTTTTTTATCGGCTTTGGAGGGAAA
GGTGCCAACCAGTGTGTCCAGGCTGCCAGGCTTGGAGCCAAGACGTCCATGGTGTGCAAG
GTTGGCAAAGATTCCTTTGGCAATGATTATATAGAAAACTTAAAACAGAATGATATTTCT
ACAGAATTTACATATCAGACGGAAGATGCTGCGACAGGAACTGCTTCAATAATTGTCAAT
AATGAAGGCCAGAATATCATCGTTATAGTGGCTGGAGCAAATTTACTTTTGAATACTGAA
GACCTGAGGGAAGCAGCCAGTACCATCAGCAGAGCCAAAGTAATGATCTGCCAGCTAGAA
GTAACTCCAGCAACTTCTTTGGAAGCCCTGACAATAGCCCACAGCAATGGAGTGAAAACA
CTGTTCAACCCAGCACCAGCCATTGCCGACCTGGACCCCCGGTTCTACACCCTCTCGGAT
GTGTTCTGCTGCAATGAAAGCGAGGCTGAGATTCTGACCGGCCTTGAGGTCCGCAGCCCC
AAGGATGCCGGGCAGGCTGCGCAGGTGCTCCTGGAGAGGGGCTGCTGCGTTGTGATCATC
ACCCTAGGGGCTGAAGGGTGTGTGATGCTGTCGCGGACAGAACCCGTCCCGAAACACATT
CCCACAGAGAAAGTCAAGGCTGTGGATACTACGGGTGCTGGTGACAGTTTTGTGGGAGCT
TTGGCCTTCTACCTGGCTTACTACCCAAACCTGTCCTTGGAAGAAATGATCAAGAGGTCC
AATTTCATCGCGGCAGTCAGCGTCCAGGCCACAGGAACACAGTCATCTTATCCATACAAA
AAAGATCTGCCCCTTTACCTGTTTTGACTGCTATTAATTCCAAAATAAATATCTCTGGAA
GTAAACGGTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCCGACGTAGAGCAATGGCCGCGTCTGGGGAACCCGGGAGGCAGTGGCAGGAGCAGGTG
GCGGCGGCAGTGGTGGTGGTGGGCTCCTGCATGACCGACCTGGTCAGCCTTACTTCTCGT
TTGCCAAAAACTGGAGAAACCATCCATGGACAGAAGTTTTTTATCGGCTTTGGAGGGAAA
GGTGCCAACCAGTGTGTCCAGGCTGCCAGGCTTGGAGCCAAGACGTCCATGGTGTGCAAG
GTTGGCAAAGATTCCTTTGGCAATGATTATATAGAAAACTTAAAACAGAATGATATTTCT
ACAGAATTTACATATCAGACGGAAGATGCTGCGACAGGAACTGCTTCAATAATTGTCAAT
AATGAAGGCCAGAATATCATCGTTATAGTGGCTGGAGCAAATTTACTTTTGAATACTGAA
GACCTGAGGGAAGCAGCCAGTACCATCAGCAGAGCCAAAGTAATGATCTGCCAGCTAGAA
GTAACTCCAGCAACTTCTTTGGAAGCCCTGACAATAGCCCACAGCAATGGAGTGAAAACA
CTGTTCAACCCAGCACCAGCCATTGCCGACCTGGACCCCCGGTTCTACACCCTCTCGGAT
GTGTTCTGCTGCAATGAAAGCGAGGCTGAGATTCTGACCGGCCTTGAGGTCCGCAGCCCC
AAGGATGCCGGGCAGGCTGCGCAGGTGCTCCTGGAGAGGGGCTGCTGCGTTGTGATCATC
ACCCTAGGGGCTGAAGGGTGTGTGATGCTGTCGCGGACAGAACCCGTCCCGAAACACATT
CCCACAGAGAAAGTCAAGGCTGTGGATACTACGGGTGCTGGTGACAGTTTTGTGGGAGCT
TTGGCCTTCTACCTGGCTTACTACCCAAACCTGTCCTTGGAAGAAATGATCAAGAGGTCC
AATTTCATCGCGGCAGTCAGCGTCCAGGCCACAGGAACACAGTCATCTTATCCATACAAA
AAAGATCTGCCCCTTTACCTGTTTTGACTGCTATTAATTCCAAAATAAATATCTCTGGAA
GTAAACGGTATT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               RBSK_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               RBSK_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               813-1030, gnl|bosTau2|chr11 (52242198-52241981)
               

               
               813-1030, gnl|Hg17|chr2 (27916307-27916090)
               

               
               813-1030, gnl|Mm7|chr5 (30657173-30656955)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               813-1030, gnl|bosTau2|chr11 (52242198-52241981)
               

               
               813-1030, gnl|Hg17|chr2 (27916307-27916090)
               

               
               813-1030, gnl|Mm7|chr5 (30657173-30656955)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               cov (0.528611)
               

               
               fty (0.351679)
               

               
               duo (0.172801)
               

               
               cli (0.152812)
               

               
               lun (0.150489)
               

               
               sug (0.127291)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.528611)
               

               
               fty (0.351679)
               

               
               duo (0.172801)
               

               
               cli (0.152812)
               

               
               lun (0.150489)
               

               
               sug (0.127291)

	813-1030, gnl\|bosTau2\|chr11 (52242198-52241981)
	813-1030, gnl\|Hg17\|chr2 (27916307-27916090)
	813-1030, gnl\|Mm7\|chr5 (30657173-30656955)

	cov (0.528611)
	fty (0.351679)
	duo (0.172801)
	cli (0.152812)
	lun (0.150489)
	sug (0.127291)