Ss1.1-Pig4-TMW8065D22.3
|
CAACAGCGGAGTCCTGAGGGGGTTCGGCTAACCCACCGGACCGGAGCCTTCTGGAGCTCT
ACACTGAGGGAATAGTGACCAAGATGTGGAATAGTGGATTTGAAAGCTATAGCAGCTCCT
CCTTTGGGGGAGCCGGCGGCTACACACAGTCCCCTGGGGGCTTTGGATCACCGACACCTT
CCCAGGCTGAAAAGAAATCTAGAGCCCGAGCTCAGCACATTGTACCCTGTACCATATCTC
AGCTGCTTTCTGCTACTCTGGTTGATGAAGTGTTCAAAATTGGGAATGTTGAGATTTCAC
AGGTGACTATTGTGGGGATAATCAGACATGCAGAGAAGGCTGCAACCAACATTGTTTACA
AAATAGATGACATGACAGCTGCACCCATGGATGTCCGCCAGTGGGTTGACACAGATGATG
CCAGTGGTGAAAACACTGTGGTTCCTCCAGAAACATATGTGAAAGTAGCTGGTCATCTGA
GATCTTTTCAGAACAAGAAAAGCCTGGTCGCTTTTAAGATCATGCCCCTGGAGGATATGA
ATGAATTCACCACACATATTCTAGAAGTAGTCAATGCACACATGCTGCTGAACAAGTCTA
ACAGCCAGCTCCTAGCAGGGAGAGTACCTGTCAGCAATCCAGGAATGGGTGAAGTTGGGA
GCTTTGGTGGGAATAGCTTCATGCCAGCAAATGGCCTCACTGTGGCCCAGAACCAGGTGC
TGAATTTAATTAAGGCTTGTCCCCGGCCTGAAGGACTGAACTTTCAGGATCTCAAGAACC
AGCTCCAACACATGAGTGTAGCCTCGATCAAGCAAGCTGTGGATTTTCTAAGCAACGAGG
GACACATCTATTCAACTGTGGATGATGATCATTTTAAATCCACAGATGCAGAATAACTGG
ATCTAACCGGGTACCTGAGATATTTTCCAGCTGGACCTATTTTCGCAATCTGTTGTCTCC
AGCTGTGCGTATATTTGGCAAGTTGACTCTAGGAAGTAAATTTCCTGTATAAAAGGTCTC
AACTGACATCCTTTTGAAACTTACTCCTCTTCTGTTTTTTGAAGCTCAAAGGGATATAAA
TGAGGGCAGAATTTCTTAAAGAAATTACAACTTAGTTACAGCATCAGGTCAGATGGAATT
GGAAGAGGGAGGATCCCAGAGAGTTGGGTGGTGTTACTTAAATAATACTCAGGAGTTTGT
GTTCCTAAATTGTTTCCTGTTGAGAGAAGATGAGCAGGACTAAAGACCGTCAGCAGAGGT
AGCCAAGAGGCCCACTAACTTCTGCCTGTTTCTGTTCCCCGCTTTAATTGTGTGTTGTTA
CTTTTAGAACTGCACTTTCATCTTGTCATAATAATTGCTGCCGCAAGTGTGTTTTTTTTA
AACATAAGGTTCTTGAGTGGTGACTTCGTGGGGCAGAATAAAGGATGATGTGTTACCCTG
TTTTGTACAAAATAAGTGCATTTATGTGTTTAATAAAATAGTTCTATT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAACAGCGGAGTCCTGAGGGGGTTCGGCTAACCCACCGGACCGGAGCCTTCTGGAGCTCT
ACACTGAGGGAATAGTGACCAAGATGTGGAATAGTGGATTTGAAAGCTATAGCAGCTCCT
CCTTTGGGGGAGCCGGCGGCTACACACAGTCCCCTGGGGGCTTTGGATCACCGACACCTT
CCCAGGCTGAAAAGAAATCTAGAGCCCGAGCTCAGCACATTGTACCCTGTACCATATCTC
AGCTGCTTTCTGCTACTCTGGTTGATGAAGTGTTCAAAATTGGGAATGTTGAGATTTCAC
AGGTGACTATTGTGGGGATAATCAGACATGCAGAGAAGGCTGCAACCAACATTGTTTACA
AAATAGATGACATGACAGCTGCACCCATGGATGTCCGCCAGTGGGTTGACACAGATGATG
CCAGTGGTGAAAACACTGTGGTTCCTCCAGAAACATATGTGAAAGTAGCTGGTCATCTGA
GATCTTTTCAGAACAAGAAAAGCCTGGTCGCTTTTAAGATCATGCCCCTGGAGGATATGA
ATGAATTCACCACACATATTCTAGAAGTAGTCAATGCACACATGCTGCTGAACAAGTCTA
ACAGCCAGCTCCTAGCAGGGAGAGTACCTGTCAGCAATCCAGGAATGGGTGAAGTTGGGA
GCTTTGGTGGGAATAGCTTCATGCCAGCAAATGGCCTCACTGTGGCCCAGAACCAGGTGC
TGAATTTAATTAAGGCTTGTCCCCGGCCTGAAGGACTGAACTTTCAGGATCTCAAGAACC
AGCTCCAACACATGAGTGTAGCCTCGATCAAGCAAGCTGTGGATTTTCTAAGCAACGAGG
GACACATCTATTCAACTGTGGATGATGATCATTTTAAATCCACAGATGCAGAATAACTGG
ATCTAACCGGGTACCTGAGATATTTTCCAGCTGGACCTATTTTCGCAATCTGTTGTCTCC
AGCTGTGCGTATATTTGGCAAGTTGACTCTAGGAAGTAAATTTCCTGTATAAAAGGTCTC
AACTGACATCCTTTTGAAACTTACTCCTCTTCTGTTTTTTGAAGCTCAAAGGGATATAAA
TGAGGGCAGAATTTCTTAAAGAAATTACAACTTAGTTACAGCATCAGGTCAGATGGAATT
GGAAGAGGGAGGATCCCAGAGAGTTGGGTGGTGTTACTTAAATAATACTCAGGAGTTTGT
GTTCCTAAATTGTTTCCTGTTGAGAGAAGATGAGCAGGACTAAAGACCGTCAGCAGAGGT
AGCCAAGAGGCCCACTAACTTCTGCCTGTTTCTGTTCCCCGCTTTAATTGTGTGTTGTTA
CTTTTAGAACTGCACTTTCATCTTGTCATAATAATTGCTGCCGCAAGTGTGTTTTTTTTA
AACATAAGGTTCTTGAGTGGTGACTTCGTGGGGCAGAATAAAGGATGATGTGTTACCCTG
TTTTGTACAAAATAAGTGCATTTATGTGTTTAATAAAATAGTTCTATT
|
|
gi|62511903|gb|AAX84514.1| |
Protein identifier
|
gi|62511903|gb|AAX84514.1| |
|
10-829, gnl|bosTau2|chr26 (35431348-35432166) |
|
10-829, gnl|Hg17|chr10 (82887109-82886360) |
|
10-829, gnl|Mm7|chr4 (132147113-132155190) |
| |
|
52-624, gnl|bosTau2|chr11 (39225434-39226002) |
|
52-624, gnl|Hg17|chr10 (82887092-82886547) |
|
52-624, gnl|Mm7|chr4 (132147113-132153565) |
| |
|
945-1062, gnl|bosTau2|chr10 (20413990-20413869) |
|
945-1062, gnl|Hg17|chr10 (82886222-82886108) |
| |
|
1065-1240, gnl|bosTau2|chr11 (40598265-40598089) |
|
1065-1240, gnl|Hg17|chr1 (27902615-27902452) |
| |
|
1269-1488, gnl|bosTau2|chr11 (40598086-40597875) |
|
1269-1488, gnl|Hg17|chr1 (27902449-27902194) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
10-829, gnl|bosTau2|chr26 (35431348-35432166) |
|
10-829, gnl|Hg17|chr10 (82887109-82886360) |
|
10-829, gnl|Mm7|chr4 (132147113-132155190) |
| |
|
52-624, gnl|bosTau2|chr11 (39225434-39226002) |
|
52-624, gnl|Hg17|chr10 (82887092-82886547) |
|
52-624, gnl|Mm7|chr4 (132147113-132153565) |
| |
|
945-1062, gnl|bosTau2|chr10 (20413990-20413869) |
|
945-1062, gnl|Hg17|chr10 (82886222-82886108) |
| |
|
1065-1240, gnl|bosTau2|chr11 (40598265-40598089) |
|
1065-1240, gnl|Hg17|chr1 (27902615-27902452) |
| |
|
1269-1488, gnl|bosTau2|chr11 (40598086-40597875) |
|
1269-1488, gnl|Hg17|chr1 (27902449-27902194) |
|
tes (0.623441) |
|
sin (0.349895) |
|
cty (0.31224) |
|
sme (0.305437) |
|
bfe (0.299715) |
|
spl (0.286369) |
|
fce (0.271592) |
|
sug (0.254582) |
|
nlu (0.191681) |
|
sto (0.179824) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
mga (0.160205) |
|
fco (0.157208) |
|
isp (0.150376) |
|
liv (0.146284) |
|
csk (0.140746) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ova (0.129132) |
|
ret (0.128733) |
|
thg (0.126791) |
|
ese (0.126502) |
|
tra (0.123092) |
|
eep (0.122564) |
|
ecc (0.115035) |
|
cbl (0.114797) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
|
tes (0.623441) |
|
sin (0.349895) |
|
cty (0.31224) |
|
sme (0.305437) |
|
bfe (0.299715) |
|
spl (0.286369) |
|
fce (0.271592) |
|
sug (0.254582) |
|
nlu (0.191681) |
|
sto (0.179824) |
|
fty (0.17584) |
|
ill (0.175593) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
mga (0.160205) |
|
fco (0.157208) |
|
isp (0.150376) |
|
liv (0.146284) |
|
csk (0.140746) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
ova (0.129132) |
|
ret (0.128733) |
|
thg (0.126791) |
|
ese (0.126502) |
|
tra (0.123092) |
|
eep (0.122564) |
|
ecc (0.115035) |
|
cbl (0.114797) |
|
nbm (0.0993246) |
|
eje (0.0988338) |
