Ss1.1-Pig4-TMW8065F15.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAGCTCGAGCGGGAGGTGGCAGCTCTGCTGGGCGGGCGGCGGCGGCGATTCCACGTGC TCCCCGCGGCCGGTTGAAACCGTTGGCGGGCGCTGGCTGAGAGAACAAGACTTAAAACCT GTCTTGGATAAGAAATATTTAATCAATCATTTAGCTAAAAATGGTATTTTTTACATGCAA TGCATGCGGTGAATCAGTGAAGAAAATACAAGTGGAAAAGCATGTGGCTCTTTGCAGAAA CTGTGAATGTCTTTCCTGCATCGACTGCGGTCAAGACTTCTGGGGTGACGACTACAAAAA CCATGTGAAATGCATAAGTGAAGATCAGAAGTATGGCGGCAAAGGGTATGAAGGCAAAAC CCACAAAGGCGACGCTAAGCAGCAGGCGTGGCTTCAGAAAATTAATGAACTAACAAAAAG ACCCAATGTCAGCCCCAAAGTGAAGGAACTTTTACAGCAAATCAGTGGCTTTGACAACGT TCCCAGGAAAAAGGCGAAATTTCAGAACTGGATGAAGAACAGTTTAAAAGTCCATAATGA GTCTGTCCTGGAGCAGGTGTGGAGTATCTTTTCTGAAGCTTCCAGCAGTGAGCCAGTCAG TAACAAAGGGCAAGATGAGCAGCCACCAGAGCAAGTGGCCCAACCCCAGGCAGAAAACTC CGCCACGGCTCCATCCTCGAAAGCAAATGACACCTTAGAAGAGCGAGCAGAGGCCAAGAA GAATAAGAGAGAAAGGAAAGAAGAAAGGCAGCAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAGCTCGAGCGGGAGGTGGCAGCTCTGCTGGGCGGGCGGCGGCGGCGATTCCACGTGC TCCCCGCGGCCGGTTGAAACCGTTGGCGGGCGCTGGCTGAGAGAACAAGACTTAAAACCT GTCTTGGATAAGAAATATTTAATCAATCATTTAGCTAAAAATGGTATTTTTTACATGCAA TGCATGCGGTGAATCAGTGAAGAAAATACAAGTGGAAAAGCATGTGGCTCTTTGCAGAAA CTGTGAATGTCTTTCCTGCATCGACTGCGGTCAAGACTTCTGGGGTGACGACTACAAAAA CCATGTGAAATGCATAAGTGAAGATCAGAAGTATGGCGGCAAAGGGTATGAAGGCAAAAC CCACAAAGGCGACGCTAAGCAGCAGGCGTGGCTTCAGAAAATTAATGAACTAACAAAAAG ACCCAATGTCAGCCCCAAAGTGAAGGAACTTTTACAGCAAATCAGTGGCTTTGACAACGT TCCCAGGAAAAAGGCGAAATTTCAGAACTGGATGAAGAACAGTTTAAAAGTCCATAATGA GTCTGTCCTGGAGCAGGTGTGGAGTATCTTTTCTGAAGCTTCCAGCAGTGAGCCAGTCAG TAACAAAGGGCAAGATGAGCAGCCACCAGAGCAAGTGGCCCAACCCCAGGCAGAAAACTC CGCCACGGCTCCATCCTCGAAAGCAAATGACACCTTAGAAGAGCGAGCAGAGGCCAAGAA GAATAAGAGAGAAAGGAAAGAAGAAAGGCAGCAGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 102-283, gnl|bosTau2|chr6 (59972054-59972234) | |
| 102-283, gnl|Hg17|chr4 (4403596-4403399) | |
| 102-283, gnl|Mm7|chr5 (37306021-37306194) | |
| 396-505, gnl|bosTau2|chr6 (59974501-59974610) | |
| 396-505, gnl|canFam2|chr3 (72546361-72546450) | |
| 396-505, gnl|dasNov1|scaffold_26313 (6159-6246) | |
| 396-505, gnl|echTel1|scaffold_278741 (44502-44587) | |
| 396-505, gnl|fr1|chrUn (112393346-112393426) | |
| 396-505, gnl|galGal2|chr4 (78851570-78851651) | |
| 396-505, gnl|hg17|chr4 (4399433-4399514) | |
| 396-505, gnl|Hg17|chr4 (4399550-4399441) | |
| 396-505, gnl|loxAfr1|scaffold_6747 (34009-33930) | |
| 396-505, gnl|mm7|chr5 (37309373-37309287) | |
| 396-505, gnl|Mm7|chr5 (37309249-37309358) | |
| 396-505, gnl|monDom2|scaffold_10 (31432933-31433014) | |
| 396-505, gnl|oryCun1|scaffold_159705 (3487-3564) | |
| 396-505, gnl|panTro1|chr3 (4408257-4408338) | |
| 396-505, gnl|rheMac2|chr5 (4498334-4498253) | |
| 396-505, gnl|rn3|chr14 (77868518-77868604) | |
| 396-505, gnl|tetNig1|chr11 (989144-989224) | |
| 605-756, gnl|bosTau2|chr6 (59978392-59978543) | |
| 605-756, gnl|canFam2|chr3 (72543088-72543294) | |
| 605-756, gnl|dasNov1|scaffold_26313 (2117-2322) | |
| 605-756, gnl|hg17|chr4 (4394383-4394586) | |
| 605-756, gnl|Hg17|chr4 (4394556-4394405) | |
| 605-756, gnl|loxAfr1|scaffold_6747 (40546-40342) | |
| 605-756, gnl|mm7|chr5 (37312135-37311944) | |
| 605-756, gnl|Mm7|chr5 (37311956-37312111) | |
| 605-756, gnl|monDom2|scaffold_10 (31430687-31430886) | |
| 605-756, gnl|oryCun1|scaffold_159705 (308-493) | |
| 605-756, gnl|panTro1|chr3 (4403206-4403409) | |
| 605-756, gnl|rheMac2|chr5 (4505650-4505447) | |
| 605-756, gnl|rn3|chr14 (77865914-77866098) | |
| 605-756, gnl|xenTro1|scaffold_119 (351691-351856) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 102-283, gnl|bosTau2|chr6 (59972054-59972234) | |
| 102-283, gnl|Hg17|chr4 (4403596-4403399) | |
| 102-283, gnl|Mm7|chr5 (37306021-37306194) | |
| 396-505, gnl|bosTau2|chr6 (59974501-59974610) | |
| 396-505, gnl|canFam2|chr3 (72546361-72546450) | |
| 396-505, gnl|dasNov1|scaffold_26313 (6159-6246) | |
| 396-505, gnl|echTel1|scaffold_278741 (44502-44587) | |
| 396-505, gnl|fr1|chrUn (112393346-112393426) | |
| 396-505, gnl|galGal2|chr4 (78851570-78851651) | |
| 396-505, gnl|hg17|chr4 (4399433-4399514) | |
| 396-505, gnl|Hg17|chr4 (4399550-4399441) | |
| 396-505, gnl|loxAfr1|scaffold_6747 (34009-33930) | |
| 396-505, gnl|mm7|chr5 (37309373-37309287) | |
| 396-505, gnl|Mm7|chr5 (37309249-37309358) | |
| 396-505, gnl|monDom2|scaffold_10 (31432933-31433014) | |
| 396-505, gnl|oryCun1|scaffold_159705 (3487-3564) | |
| 396-505, gnl|panTro1|chr3 (4408257-4408338) | |
| 396-505, gnl|rheMac2|chr5 (4498334-4498253) | |
| 396-505, gnl|rn3|chr14 (77868518-77868604) | |
| 396-505, gnl|tetNig1|chr11 (989144-989224) | |
| 605-756, gnl|bosTau2|chr6 (59978392-59978543) | |
| 605-756, gnl|canFam2|chr3 (72543088-72543294) | |
| 605-756, gnl|dasNov1|scaffold_26313 (2117-2322) | |
| 605-756, gnl|hg17|chr4 (4394383-4394586) | |
| 605-756, gnl|Hg17|chr4 (4394556-4394405) | |
| 605-756, gnl|loxAfr1|scaffold_6747 (40546-40342) | |
| 605-756, gnl|mm7|chr5 (37312135-37311944) | |
| 605-756, gnl|Mm7|chr5 (37311956-37312111) | |
| 605-756, gnl|monDom2|scaffold_10 (31430687-31430886) | |
| 605-756, gnl|oryCun1|scaffold_159705 (308-493) | |
| 605-756, gnl|panTro1|chr3 (4403206-4403409) | |
| 605-756, gnl|rheMac2|chr5 (4505650-4505447) | |
| 605-756, gnl|rn3|chr14 (77865914-77866098) | |
| 605-756, gnl|xenTro1|scaffold_119 (351691-351856) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| cte (0.58548) | |
| ecc (0.23007) | |
| mas (0.210305) | |
| ill (0.175593) | |
| cut (0.169924) | |
| lin (0.145603) | |
| che (0.136314) | |
| thg (0.126791) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.58548) | |
| ecc (0.23007) | |
| mas (0.210305) | |
| ill (0.175593) | |
| cut (0.169924) | |
| lin (0.145603) | |
| che (0.136314) | |
| thg (0.126791) |