Ss1.1-Pig4-TMW8065G13.3
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TAGATTCACTAATATGCTTGGTCAGCCGGGATCAACTGCACTTGACCTTTTCAAGTTTTA
TGTTGAGGATCTTAAAGCACGTTACCATGATGAGAAGAAGATAATAAAAGACATTCTAAA
GGATAAAGGATTTGTAGTTGAAGTAAATACTACTTTTGAAGACTTTGTGGCAATAATCAG
TTCAACAAAAAGATCAACCACATTAGATGCAGGAAACATTAAGTTAGCTTTCAATAGTTT
ACTAGAAAAGGCAGAAGCCCGTGAACGTGAAAGGGAAAAAGAGGAGGCTCGGAAGATGAA
ACGAAAAGAATCGGCATTTAAGAGTATGTTGAAACAAGCAACTCCTCCAATAGAATTGGA
TGCTGTCTGGGAAGATATCCGGGAGAGATTTGTAAAAGAGCCAGCGTTTGAGGATATAAC
TCTAGAATCTGAAAGAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATG
TCAACATCATCATTCAAAGAACAAGAAACATTCTAAGAAATCTAAAAAACATCACAGGAA
ACGTTCCCGCTCTCGATCAGGGTCAGATTCAGATGATGATGACAGCCATTCAAAGAAAAA
AAGACAGAGATCAGAGTCTCGCTCTGCTTCAGAACATTCTTCTAGTGCTGAATCTGAGAG
AAGTTATAAGAAATCAAAAAAACATAAGAAGAAAAGCAAGAAGAGAAGGCATAAATCTGA
CTCCCCAGAATCAGATGCTGAACGAGAGAAGGATAAAAAAGAAAAAGACCGGGAAAGTGA
AAAAGACAGAACTAGACAAAGATCAGAATCAAAACACAAATCACCTAAGAAAAAGACTGG
AAAGGATTCTGGTAATTGGGACACTTCTGGCAGTGAACTGAGTGAAGGGGAATTAGAAAA
GCGCAGAAGGACCCTTCTGGAGCAACTGGATGATGATCAATAAATTATACCAAATATGTT
TACAGTATGATTTAAAGTCTAATTCAGACCAGGGACTCTATTTTAAGTTCAATTGAAATA
ACACTGGGTTTTAATTATATCACAGAAAAAAAAAAAGTGCATTTAAGTATTGTTATTGTG
GACTTTATAAAAGCAAAGGAAATTGAAAATACTTTTGATTCTGTATCAAGAATCATATTT
TCATACAGTCATAACTGTCTCTCTGTGACCCTTTCATAGGGCACTGCAGGATGGATTAAA
GGTGGCAATTTACTGATAACTGCAGGTGTCTCTACTTTGTTCTCAAATCTGAGTCATGAG
GTGATTTGATTTACTTTATAGAAGTTGGATTTTGAAGATATAATGAAAATTTTTTGATAT
CTAGTAGTACAAAAAAAGCACCAGCAACTGATAAAACTGCTTTTTTGTGCACTACCCAAC
TGGTTAAAGCTGATAAGATCTTTTATGGTGATCTCAGAAATAGGTGTTCTTAATGGAAAC
CTGGTAGACCCTTAACTGTAGTGGTGCTATTGAGCACTACTATAATAAAGCCACCATTAT
TTTTTATGAACCATCTGAATACATTTTAAAAAGGCTACTGTGAGGGCATTATTTTGAGGT
GATGTTTAAAAAGTTAACATCAAATTGTAAATTAGTTTAAATATATTGCCTTAAGGACCT
ACTAAAGAATGTGCCACCAAACTTTTAAGTGATGGTTGCAATATCCTTGTCTAAAACAAG
TCAATGTTGACTTAAACAATTTCTTTAACAGTTGGTTTTTTTTTTTTTTAAATCCAATCT
TTCTTTTTTCATTGAGGAAGTCTTTTACCTTCCCTACTCACTAAGAAAGTATTGACTTCA
TGGTACACATTCTAAAGCATTTCTGATTTGAATATTTTTGTACATTTTTATCAATTATTA
AACCTTCTCTTC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TAGATTCACTAATATGCTTGGTCAGCCGGGATCAACTGCACTTGACCTTTTCAAGTTTTA
TGTTGAGGATCTTAAAGCACGTTACCATGATGAGAAGAAGATAATAAAAGACATTCTAAA
GGATAAAGGATTTGTAGTTGAAGTAAATACTACTTTTGAAGACTTTGTGGCAATAATCAG
TTCAACAAAAAGATCAACCACATTAGATGCAGGAAACATTAAGTTAGCTTTCAATAGTTT
ACTAGAAAAGGCAGAAGCCCGTGAACGTGAAAGGGAAAAAGAGGAGGCTCGGAAGATGAA
ACGAAAAGAATCGGCATTTAAGAGTATGTTGAAACAAGCAACTCCTCCAATAGAATTGGA
TGCTGTCTGGGAAGATATCCGGGAGAGATTTGTAAAAGAGCCAGCGTTTGAGGATATAAC
TCTAGAATCTGAAAGAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATG
TCAACATCATCATTCAAAGAACAAGAAACATTCTAAGAAATCTAAAAAACATCACAGGAA
ACGTTCCCGCTCTCGATCAGGGTCAGATTCAGATGATGATGACAGCCATTCAAAGAAAAA
AAGACAGAGATCAGAGTCTCGCTCTGCTTCAGAACATTCTTCTAGTGCTGAATCTGAGAG
AAGTTATAAGAAATCAAAAAAACATAAGAAGAAAAGCAAGAAGAGAAGGCATAAATCTGA
CTCCCCAGAATCAGATGCTGAACGAGAGAAGGATAAAAAAGAAAAAGACCGGGAAAGTGA
AAAAGACAGAACTAGACAAAGATCAGAATCAAAACACAAATCACCTAAGAAAAAGACTGG
AAAGGATTCTGGTAATTGGGACACTTCTGGCAGTGAACTGAGTGAAGGGGAATTAGAAAA
GCGCAGAAGGACCCTTCTGGAGCAACTGGATGATGATCAATAAATTATACCAAATATGTT
TACAGTATGATTTAAAGTCTAATTCAGACCAGGGACTCTATTTTAAGTTCAATTGAAATA
ACACTGGGTTTTAATTATATCACAGAAAAAAAAAAAGTGCATTTAAGTATTGTTATTGTG
GACTTTATAAAAGCAAAGGAAATTGAAAATACTTTTGATTCTGTATCAAGAATCATATTT
TCATACAGTCATAACTGTCTCTCTGTGACCCTTTCATAGGGCACTGCAGGATGGATTAAA
GGTGGCAATTTACTGATAACTGCAGGTGTCTCTACTTTGTTCTCAAATCTGAGTCATGAG
GTGATTTGATTTACTTTATAGAAGTTGGATTTTGAAGATATAATGAAAATTTTTTGATAT
CTAGTAGTACAAAAAAAGCACCAGCAACTGATAAAACTGCTTTTTTGTGCACTACCCAAC
TGGTTAAAGCTGATAAGATCTTTTATGGTGATCTCAGAAATAGGTGTTCTTAATGGAAAC
CTGGTAGACCCTTAACTGTAGTGGTGCTATTGAGCACTACTATAATAAAGCCACCATTAT
TTTTTATGAACCATCTGAATACATTTTAAAAAGGCTACTGTGAGGGCATTATTTTGAGGT
GATGTTTAAAAAGTTAACATCAAATTGTAAATTAGTTTAAATATATTGCCTTAAGGACCT
ACTAAAGAATGTGCCACCAAACTTTTAAGTGATGGTTGCAATATCCTTGTCTAAAACAAG
TCAATGTTGACTTAAACAATTTCTTTAACAGTTGGTTTTTTTTTTTTTTAAATCCAATCT
TTCTTTTTTCATTGAGGAAGTCTTTTACCTTCCCTACTCACTAAGAAAGTATTGACTTCA
TGGTACACATTCTAAAGCATTTCTGATTTGAATATTTTTGTACATTTTTATCAATTATTA
AACCTTCTCTTC
|
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220-376, gnl|bosTau2|chr2 (9503976-9503820) |
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220-376, gnl|canFam2|chr19 (56687578-56687712) |
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220-376, gnl|dasNov1|scaffold_5308 (72160-72294) |
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220-376, gnl|echTel1|scaffold_318506 (89054-88919) |
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220-376, gnl|fr1|chrUn (25944145-25944011) |
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220-376, gnl|galGal2|chr7 (36210550-36210684) |
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220-376, gnl|hg17|chr2 (153345058-153345192) |
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220-376, gnl|Hg17|chr2 (153345215-153345057) |
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220-376, gnl|loxAfr1|scaffold_1672 (10780-10646) |
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220-376, gnl|mm7|chr2 (53152545-53152679) |
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220-376, gnl|Mm7|chr2 (53152701-53152544) |
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220-376, gnl|monDom2|scaffold_2 (43934796-43934900) |
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220-376, gnl|oryCun1|scaffold_153764 (10454-10586) |
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220-376, gnl|panTro1|chr13 (42411428-42411562) |
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220-376, gnl|rheMac2|chr12 (16313622-16313756) |
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220-376, gnl|rn3|chr3 (34564985-34565119) |
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220-376, gnl|xenTro1|scaffold_524 (344853-344987) |
| |
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719-851, gnl|bosTau2|chr2 (9500041-9499909) |
|
719-851, gnl|Hg17|chr2 (153340042-153339910) |
|
719-851, gnl|Mm7|chr2 (53147903-53147771) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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220-376, gnl|bosTau2|chr2 (9503976-9503820) |
|
220-376, gnl|canFam2|chr19 (56687578-56687712) |
|
220-376, gnl|dasNov1|scaffold_5308 (72160-72294) |
|
220-376, gnl|echTel1|scaffold_318506 (89054-88919) |
|
220-376, gnl|fr1|chrUn (25944145-25944011) |
|
220-376, gnl|galGal2|chr7 (36210550-36210684) |
|
220-376, gnl|hg17|chr2 (153345058-153345192) |
|
220-376, gnl|Hg17|chr2 (153345215-153345057) |
|
220-376, gnl|loxAfr1|scaffold_1672 (10780-10646) |
|
220-376, gnl|mm7|chr2 (53152545-53152679) |
|
220-376, gnl|Mm7|chr2 (53152701-53152544) |
|
220-376, gnl|monDom2|scaffold_2 (43934796-43934900) |
|
220-376, gnl|oryCun1|scaffold_153764 (10454-10586) |
|
220-376, gnl|panTro1|chr13 (42411428-42411562) |
|
220-376, gnl|rheMac2|chr12 (16313622-16313756) |
|
220-376, gnl|rn3|chr3 (34564985-34565119) |
|
220-376, gnl|xenTro1|scaffold_524 (344853-344987) |
| |
|
719-851, gnl|bosTau2|chr2 (9500041-9499909) |
|
719-851, gnl|Hg17|chr2 (153340042-153339910) |
|
719-851, gnl|Mm7|chr2 (53147903-53147771) |
|
pro (0.512033) |
|
fat (0.294855) |
|
ski (0.29347) |
|
ecc (0.23007) |
|
cty (0.20816) |
|
tes (0.207814) |
|
tbr (0.154178) |
|
ctl (0.153069) |
|
bfe (0.149858) |
|
liv (0.146284) |
|
pty (0.142714) |
|
ute (0.132784) |
|
thg (0.126791) |
|
tra (0.123092) |
|
eru (0.120048) |
|
spc (0.113366) |
|
nbm (0.0993246) |
|
pro (0.512033) |
|
fat (0.294855) |
|
ski (0.29347) |
|
ecc (0.23007) |
|
cty (0.20816) |
|
tes (0.207814) |
|
tbr (0.154178) |
|
ctl (0.153069) |
|
bfe (0.149858) |
|
liv (0.146284) |
|
pty (0.142714) |
|
ute (0.132784) |
|
thg (0.126791) |
|
tra (0.123092) |
|
eru (0.120048) |
|
spc (0.113366) |
|
nbm (0.0993246) |
